Borre_00310 Borre_00310   Borre_00330 Borre_00330

Borre_00320 : CDS information

close this sectionLocation

Organism
StrainTü4055
Entry nameBorrelidin
Contig
Start / Stop / Direction62,285 / 61,767 / - [in whole cluster]
62,285 / 61,767 / - [in contig]
Locationcomplement(61767..62285) [in whole cluster]
complement(61767..62285) [in contig]
TypeCDS
Length519 bp (172 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORFB12
Reference
ACC
PmId
[15112998] Biosynthesis of the angiogenesis inhibitor borrelidin by Streptomyces parvulus Tu4055: cluster analysis and assignment of functions. (Chem Biol. , 2004)
comment
Borrelidin生合成gene clusterのクローニング。
orfB12: closest similar to putative regulator of the two component system

borrelidin生合成に必要な機能や役割をもつタンパクに類似性がない、またはputative functionsがborrelidin生合成のために必要かわからないもの。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MRCSHRAGGVGARAWLGGNVAVDMGETGLDGSSTQRAPEGADPRAASVTYRREALRIADA
RHFATDYLTRSQRDLRSPVPERASEAVHLVVSELITNAVKYGADPIELTLSLTDDAVTVT
VRDGDTTLPAPRPADPARVGQHGLEIVAALSQAVEIRPEPSGKRITARIALT
selected fasta
>hypothetical protein [hypothetical protein]
ATGAGATGTTCTCATCGCGCGGGAGGCGTCGGCGCGCGTGCGTGGCTCGGGGGTAACGTG
GCGGTTGACATGGGTGAGACCGGACTGGACGGTTCGTCGACACAGCGGGCACCGGAGGGT
GCGGATCCGCGGGCGGCCTCGGTGACGTACCGGCGGGAAGCGCTGCGGATCGCCGACGCC
CGTCACTTCGCGACCGACTACCTCACCCGTTCACAGCGGGACCTTCGGTCGCCGGTGCCG
GAGAGAGCGTCGGAGGCCGTCCACCTGGTGGTGAGCGAGCTGATCACGAACGCGGTCAAG
TACGGGGCCGACCCCATAGAACTCACCCTGAGCCTCACGGACGACGCGGTGACTGTCACC
GTGCGAGACGGTGACACCACCCTGCCCGCTCCCCGGCCCGCCGATCCCGCCCGGGTGGGT
CAGCACGGTCTGGAGATCGTGGCGGCGCTGAGCCAGGCCGTCGAGATCCGGCCCGAGCCG
TCCGGCAAGCGCATCACCGCACGGATCGCCCTCACCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR003594 ATPase-like, ATP-binding domain (Domain)
[47-169] 1.10000029896148e-07 SSF55874
SSF55874   ATP_bd_ATPase
[82-171] 0.0129999995835436 SM00387
SM00387   HATPase_c
[64-133] 7.59999999999999e-06 G3DSA:3.30.565.10
G3DSA:3.30.565.10   ATP_bd_ATPase
SignalP No significant hit
TMHMM No significant hit
Borre_00310 Borre_00310   Borre_00330 Borre_00330
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