Epoth_00080 : CDS information
Location
Organism | Sorangium cellulosum |
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Strain | So ce90 |
Entry name | Epothilone |
Contig | AF210843 |
Start / Stop / Direction | 16,251 / 21,749 / + [in whole cluster] 16,251 / 21,749 / + [in contig] |
Location | 16251..21749 [in whole cluster] 16251..21749 [in contig] |
Type | CDS |
Length | 5,499 bp (1,832 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase |
Product (GenBank) | polyketide synthase |
Gene | |
Gene (GenBank) | epoB |
EC number | |
Keyword | |
Note | |
Note (GenBank) |
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Reference |
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Related Reference |
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PKS/NRPS Module
2 | methylmalonyl-CoA not conserved YASHS(Y->V) |
Sequence
>polyketide synthase [polyketide synthase] MEEQESSAIAVIGMSGRFPGARDLDEFWRNLRDGTEAVQRFSEQELAASGVDPALVLDPS YVRAGSVLEDVDRFDAAFFGISPREAELMDPQHRIFMECAWEALENAGYDPTAYEGSIGV YAGANMSSYLTSNLHEHPAMMRWPGWFQTLIGNDKDYLATHVSYRLNLRGPSISVQTACS TSLVAVHLACMSLLDRECDMALAGGITVRIPHRAGYVYAEGGIFSPDGHCRAFDAKANGT IMGNGCGVVLLKPLDRALSDGDPVRAVILGSATNNDGARKIGFTAPSEVGQAQAIMEALA LAGVEARSIQYIETHGTGTLLGDAIETAALRRVFGRDASARRSCAIGSVKTGIGHLESAA GIAGLIKTVLALEHRQLPPSLNFESPNPSIDFASSPFYVNTSLKDWNTGSTPRRAGVSSF GIGGTNAHVVLEEAPAAKLPAAAPARSAELFVVSAKSAAALDAAAARLRDHLQAHQGISL GDVAFSLATTRSPMEHRLAMAAPSREALREGLDAAARGQTPPGAVRGRCSPGNVPKVVFV FPGQGSQWVGMGRQLLAEEPVFHAALSACDRAIQAEAGWSLLAELAADEGSSQLERIDVV QPVLFALAVAFAALWRSWGVAPDVVIGHSMGEVAAAHVAGALSLEDAVAIICRRSRLLRR ISGQGEMAVTELSLAEAEAALRGYEDRVSVAVSNSPRSTVLSGEPAAIGEVLSSLNAKGV FCRRVKVDVASHSPQVDPLREDLLAALGGLRPGAAAVPMRSTVTGAMVAGPELGANYWMN NLRQPVRFAEVVQAQLQGGHGLFVEMSPHPILTTSVEEMRRAAQRAGAAVGSLRRGQDER PAMLEALGTLWAQGYPVPWGRLFPAGGRRVPLPTYPWQRERYWIEAPAKSAAGDRRGVRA GGHPLLGEMQTLSTQTSTRLWETTLDLKRLPWLGDHRVQGAVVFPGAAYLEMAISSGAEA LGDGPLQITDVVLAEALAFAGDAAVLVQVVTTEQPSGRLQFQIASRAPGAGHASFRVHAR GALLRVERTEVPAGLTLSAVRARLQASIPAAATYAELTEMGLQYGPAFQGIAELWRGEGE ALGRVRLPDAAGSAAEYRLHPALLDACFQIVGSLFARSGEATPWVPVELGSLRLLQRPSG ELWCHARVVNHGHQTPDRQGADFWVVDSSGAVVAEVCGLVAQRLPGGVRRREEDDWFLEL EWEPAAVGTAKVNAGRWLLLGGGGGLGAALRAMLEAGGHAVVHAAENNTSAAGVRALLAK AFDGQAPTAVVHLGSLDGGGELDPGLGAQGALDAPRSADVSPDALDPALVRGCDSVLWTV QALAGMGFRDAPRLWLLTRGAQAVGAGDVSVTQAPLLGLGRVIAMEHADLRCARVDLDPA RPEGELAALLAELLADDAEAEVALRGGERCVARIVRRQPETRPRGRIESCVPTDVTIRAD STYLVTGGLGGLGLSVAGWLAERGAGHLVLVGRSGAASVEQRAAVAALEARGARVTVAKA DVADRAQLERILREVTTSGMPLRGVVHAAGILDDGLLMQQTPARFRKVMAPKVQGALHLH ALTREAPLSFFVLYASGVGLLGSPGQGNYAAANTFLDALAHHRRAQGLPALSVDWGLFAE VGMAAAQEDRGARLVSRGMRSLTPDEGLSALARLLESGRAQVGVMPVNPRLWVELYPAAA SSRMLSRLVTAHRASAGGPAGDGDLLRRLAAAEPSARSALLEPLLRAQISQVLRLPEGKI EVDAPLTSLGMNSLMGLELRNRIEAMLGITVPATLLWTYPTVAALSGHLAREACEAAPVE SPHTTADSAVEIEEMSQDDLTQLIAAKFKALT
>polyketide synthase [polyketide synthase] ATGGAAGAACAAGAGTCCTCCGCTATCGCAGTCATCGGCATGTCGGGCCGTTTTCCGGGG GCGCGGGATCTGGACGAATTCTGGAGGAACCTTCGAGACGGCACGGAGGCCGTGCAGCGC TTCTCCGAGCAGGAGCTCGCGGCGTCCGGAGTCGACCCCGCGCTGGTGCTGGACCCGAGC TACGTCCGGGCGGGCAGCGTGCTGGAAGACGTCGACCGGTTCGACGCTGCTTTCTTCGGC ATCAGCCCGCGCGAGGCAGAGCTCATGGATCCGCAGCACCGGATCTTCATGGAATGCGCC TGGGAGGCGCTGGAGAACGCCGGATACGACCCGACGGCTTACGAGGGCTCTATCGGCGTG TACGCCGGCGCCAACATGAGCTCGTACTTGACGTCGAACCTCCACGAGCACCCAGCGATG ATGCGGTGGCCCGGCTGGTTTCAGACGTTGATCGGCAACGACAAGGATTACCTCGCGACC CACGTCTCCTACAGGCTGAATCTGAGAGGGCCGAGCATCTCCGTTCAAACTGCCTGCTCC ACCTCGCTCGTGGCGGTTCACTTGGCGTGCATGAGCCTCCTGGACCGCGAGTGCGACATG GCGCTGGCCGGCGGGATTACCGTCCGGATCCCCCATCGAGCCGGCTATGTATATGCTGAG GGGGGCATCTTCTCTCCCGACGGCCATTGCCGGGCCTTCGACGCCAAGGCGAACGGCACG ATCATGGGCAACGGCTGCGGCGTTGTCCTCCTGAAGCCGCTGGACCGGGCGCTCTCCGAT GGTGATCCCGTCCGCGCGGTTATCCTTGGGTCTGCCACAAACAACGACGGAGCGAGGAAG ATCGGGTTCACTGCGCCCAGTGAGGTGGGCCAGGCGCAAGCGATCATGGAGGCGCTGGCG CTGGCAGGGGTCGAGGCCCGGTCCATCCAATACATCGAGACCCACGGGACCGGCACGCTG CTCGGAGACGCCATCGAGACGGCGGCGCTGCGGCGGGTGTTCGGTCGCGACGCTTCGGCC CGGAGGTCTTGCGCGATCGGCTCCGTGAAGACCGGCATCGGACACCTCGAATCGGCGGCT GGCATCGCCGGTTTGATCAAGACGGTCTTGGCGCTGGAGCACCGGCAGCTGCCGCCCAGC CTGAACTTCGAGTCTCCTAACCCATCGATCGATTTCGCGAGCAGCCCGTTCTACGTCAAT ACCTCTCTTAAGGATTGGAATACCGGCTCGACTCCGCGGCGGGCCGGCGTCAGCTCGTTC GGGATCGGCGGCACCAACGCCCATGTCGTGCTGGAGGAAGCGCCCGCGGCGAAGCTTCCA GCCGCGGCGCCGGCGCGCTCTGCCGAGCTCTTCGTCGTCTCGGCCAAGAGCGCAGCGGCG CTGGATGCCGCGGCGGCACGGCTACGAGATCATCTGCAGGCGCACCAGGGGATTTCGTTG GGCGACGTCGCCTTCAGCCTGGCGACGACGCGCAGCCCCATGGAGCACCGGCTCGCGATG GCGGCGCCGTCGCGCGAGGCGTTGCGAGAGGGGCTCGACGCAGCGGCGCGAGGCCAGACC CCGCCGGGCGCCGTGCGTGGCCGCTGCTCCCCAGGCAACGTGCCGAAGGTGGTCTTCGTC TTTCCCGGCCAGGGCTCTCAGTGGGTCGGCATGGGCCGGCAGCTCCTGGCTGAGGAACCC GTCTTCCACGCGGCGCTTTCGGCGTGCGACCGGGCCATCCAGGCCGAAGCTGGTTGGTCG CTGCTCGCGGAGCTCGCCGCCGACGAAGGGTCCTCCCAGCTCGAGCGCATCGACGTGGTG CAGCCGGTGCTGTTCGCCCTCGCGGTGGCATTTGCGGCGCTGTGGCGGTCGTGGGGTGTC GCGCCCGACGTCGTGATCGGCCACAGCATGGGCGAGGTAGCCGCCGCGCATGTGGCCGGG GCGCTGTCGCTCGAGGATGCGGTGGCGATCATCTGCCGGCGCAGCCGGCTGCTCCGGCGC ATCAGCGGTCAGGGCGAGATGGCGGTGACCGAGCTGTCGCTGGCCGAGGCCGAGGCGGCG CTCCGAGGCTACGAGGATCGGGTGAGCGTGGCCGTGAGCAACAGCCCGCGCTCGACGGTG CTCTCGGGCGAGCCGGCAGCGATCGGCGAGGTGCTGTCGTCCCTGAACGCGAAGGGGGTG TTCTGCCGTCGGGTGAAGGTGGATGTCGCCAGCCACAGCCCGCAGGTCGACCCGCTGCGC GAGGACCTCTTGGCAGCCCTGGGCGGGCTCCGGCCGGGTGCGGCTGCGGTGCCGATGCGC TCGACGGTGACGGGCGCCATGGTAGCGGGCCCGGAGCTCGGAGCGAATTACTGGATGAAC AACCTCAGGCAGCCAGTGCGCTTCGCCGAGGTAGTCCAGGCGCAGCTCCAAGGCGGCCAC GGTCTGTTCGTGGAGATGAGCCCGCATCCGATCCTAACGACTTCGGTCGAGGAGATGCGG CGCGCGGCCCAGCGGGCGGGCGCAGCGGTGGGCTCGCTGCGGCGGGGGCAGGACGAGCGC CCGGCGATGCTGGAGGCGCTGGGCACGCTGTGGGCGCAGGGCTACCCTGTACCCTGGGGG CGGCTGTTTCCCGCGGGGGGGCGGCGGGTACCGCTGCCGACCTATCCCTGGCAGCGCGAG CGGTACTGGATCGAAGCGCCGGCCAAGAGCGCCGCGGGCGATCGCCGCGGCGTGCGTGCG GGCGGTCACCCGCTCCTCGGTGAAATGCAGACCCTGTCAACCCAGACGAGCACGCGGCTG TGGGAGACGACGCTGGATCTCAAGCGGCTGCCGTGGCTCGGCGACCACCGGGTGCAGGGA GCGGTCGTGTTTCCGGGCGCGGCGTACCTGGAGATGGCGATTTCGTCGGGGGCCGAGGCT TTGGGCGATGGCCCTTTGCAGATAACTGACGTGGTGCTCGCCGAGGCGCTGGCCTTCGCG GGCGACGCGGCGGTGTTGGTCCAGGTGGTGACGACGGAGCAGCCGTCGGGGCGGCTGCAG TTCCAGATCGCGAGCCGGGCGCCGGGCGCTGGCCACGCGTCCTTCCGGGTCCACGCTCGC GGCGCGTTGCTCCGAGTGGAGCGCACCGAGGTCCCGGCTGGGCTTACGCTTTCCGCTGTG CGCGCGCGGCTCCAGGCCAGCATACCCGCCGCGGCCACCTACGCGGAGCTGACCGAGATG GGGCTGCAGTACGGCCCTGCCTTCCAGGGGATTGCTGAGCTATGGCGGGGTGAAGGCGAG GCGCTGGGACGGGTACGCCTGCCCGACGCGGCCGGCTCGGCAGCGGAGTATCGGTTGCAT CCTGCGCTGCTGGACGCGTGCTTCCAGATCGTCGGCAGCCTCTTCGCCCGCAGTGGCGAG GCGACGCCGTGGGTGCCCGTGGAGTTGGGCTCGCTGCGGCTCTTGCAGCGGCCTTCGGGG GAGCTGTGGTGCCATGCGCGCGTCGTGAACCATGGGCACCAAACCCCCGATCGGCAGGGC GCCGACTTTTGGGTGGTCGACAGCTCGGGTGCAGTGGTCGCCGAAGTTTGCGGGCTCGTG GCGCAGCGGCTTCCGGGAGGGGTGCGCCGGCGCGAAGAAGACGATTGGTTCCTGGAGCTC GAGTGGGAACCCGCAGCGGTCGGCACAGCCAAGGTCAACGCGGGCCGGTGGCTGCTCCTC GGCGGCGGCGGTGGGCTCGGCGCCGCGTTGCGCGCGATGCTGGAGGCCGGCGGCCATGCC GTCGTGCATGCGGCAGAGAACAACACGAGCGCTGCCGGCGTACGCGCGCTCCTGGCAAAG GCCTTTGACGGCCAGGCTCCGACGGCGGTGGTGCACCTCGGCAGCCTCGATGGGGGTGGC GAGCTCGACCCAGGGCTCGGGGCGCAAGGCGCATTGGACGCGCCCCGGAGCGCCGACGTC AGTCCCGATGCCCTCGATCCGGCGCTGGTACGTGGCTGCGACAGCGTGCTCTGGACCGTG CAGGCCCTGGCCGGCATGGGCTTTCGAGACGCCCCGCGATTGTGGCTTTTGACCCGCGGC GCACAGGCCGTCGGCGCCGGCGACGTCTCCGTGACACAGGCACCGCTGCTGGGGCTGGGC CGCGTCATCGCCATGGAGCACGCGGATCTGCGCTGCGCTCGGGTCGACCTCGATCCAGCC CGGCCCGAGGGGGAGCTCGCTGCCCTGCTGGCCGAGCTGCTGGCCGACGACGCCGAAGCG GAAGTCGCGTTGCGCGGTGGCGAGCGATGCGTCGCTCGGATCGTCCGCCGGCAGCCCGAG ACCCGGCCCCGGGGGAGGATCGAGAGCTGCGTTCCGACCGACGTCACCATCCGCGCGGAC AGCACCTACCTTGTGACCGGCGGTCTGGGTGGGCTCGGTCTGAGCGTGGCCGGATGGCTG GCCGAGCGCGGCGCTGGTCACCTGGTGCTGGTGGGCCGCTCCGGCGCGGCGAGCGTGGAG CAACGGGCAGCCGTCGCGGCGCTCGAGGCCCGCGGCGCGCGCGTCACCGTGGCGAAGGCG GATGTCGCCGATCGGGCGCAGCTCGAGCGGATCCTCCGCGAGGTTACCACGTCGGGGATG CCGCTGCGGGGCGTCGTCCATGCGGCCGGCATCTTGGACGACGGGCTGCTGATGCAGCAG ACTCCCGCGCGGTTTCGTAAGGTGATGGCGCCCAAGGTCCAGGGGGCCTTGCACCTGCAC GCGTTGACGCGCGAAGCGCCGCTTTCCTTCTTCGTGCTGTACGCTTCGGGAGTAGGGCTC TTGGGCTCGCCGGGCCAGGGCAACTACGCCGCGGCCAACACGTTCCTCGACGCTCTGGCG CACCACCGGAGGGCGCAGGGGCTGCCAGCGTTGAGCGTCGACTGGGGCCTGTTCGCGGAG GTGGGCATGGCGGCCGCGCAGGAAGATCGCGGCGCGCGGCTGGTCTCCCGCGGAATGCGG AGCCTCACCCCCGACGAGGGGCTGTCCGCTCTGGCACGGCTGCTCGAAAGCGGCCGCGCT CAGGTGGGGGTGATGCCGGTGAACCCGCGGCTGTGGGTGGAGCTCTACCCCGCGGCGGCG TCTTCGCGAATGTTGTCGCGCCTGGTGACGGCGCATCGCGCGAGCGCCGGCGGGCCAGCC GGGGACGGGGACCTGCTCCGCCGCCTCGCCGCTGCCGAGCCGAGCGCGCGGAGCGCGCTC CTGGAGCCGCTCCTCCGCGCGCAGATCTCGCAGGTGCTGCGCCTCCCCGAGGGCAAGATC GAGGTGGACGCCCCGCTCACGAGCCTGGGCATGAACTCGCTGATGGGGCTCGAGCTGCGC AACCGCATCGAGGCCATGCTGGGCATCACCGTACCGGCAACGCTGTTGTGGACCTATCCC ACGGTGGCGGCGCTGAGCGGGCATCTGGCGCGGGAGGCATGCGAAGCCGCTCCTGTGGAG TCACCGCACACCACCGCCGACTCTGCCGTCGAGATCGAGGAGATGTCGCAGGACGATCTG ACGCAGTTGATCGCAGCAAAATTCAAGGCGCTTACATGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001227 Acyl transferase domain (Domain)
IPR006162 Phosphopantetheine attachment site (PTM)
IPR009081 Acyl carrier protein-like (Domain)
IPR013968 Polyketide synthase, KR (Domain)
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR014043 Acyl transferase (Domain)
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase (Domain)
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR016040 NAD(P)-binding domain (Domain)
IPR018201 Beta-ketoacyl synthase, active site (Active_site)
IPR020801 Polyketide synthase, acyl transferase domain (Domain)
IPR020806 Polyketide synthase, phosphopantetheine-binding domain (Domain)
IPR020807 Polyketide synthase, dehydratase domain (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
IPR020842 Polyketide synthase/Fatty acid synthase, KR (Domain)
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SignalP | No significant hit |
TMHMM | No significant hit |