MUP_00590 : CDS information

Location

Organism	Mycobacterium ulcerans
Strain	Agy99
Entry name	Mycolactone
Contig	BX649209
Start / Stop / Direction	154,641 / 153,595 / - [in whole cluster] 154,641 / 153,595 / - [in contig]
Location	complement(153595..154641) [in whole cluster] complement(153595..154641) [in contig]
Type	CDS
Length	1,047 bp (348 aa)

Annotation

Category
Product
Product (GenBank)	probable transposase for the insertion element IS2404
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	MUP059c, -, len: 348 aa. Probable transposase for IS2404, highly similar to O07439 Putative transposase from Mycobacterium ulcerans (327 aa), fasta scores: opt: 1839, E(): 2.4e-119, (92.949% identity in 312 aa overlap).

Sequence

>[probable transposase for the insertion element IS2404]
MALLAIAVLATAAGMRGYAGFATWAATASDDVLAQLGVRFRRPSEKIFRAVLSRLDPADL
NARMGSYFTAHVASSDPSGLVPIALDGKMLRGALRAKATATHLVSVFAHRARLVLGQLAV
AEKSNEIPCVCALLTLLPDNLRWLVTVDAMHTQVVTAKLICATLKSHYLMIVKSNQAKIL
ARITALPWAEVPAAATDDSRGHGRVETRTLQIITAARGIGFPYAKQIIRITRERLITATD
QRSVEVVYAICSLPFEHARPTAIMTWMRQHCGIENSLHWIRDVTFDEDRHRAHTGNGAQV
LATLRNTAINLHRLNGADNIAEACRITALTANRRLDLLNPQFPSSQAC

>[probable transposase for the insertion element IS2404]
ATGGCTTTGTTGGCGATCGCGGTTCTGGCCACTGCCGCGGGGATGCGCGGCTATGCTGGT
TTTGCCACATGGGCGGCCACCGCTTCCGATGATGTGTTGGCCCAATTAGGGGTCCGGTTC
CGGCGGCCCAGTGAGAAGATCTTCCGCGCTGTTTTGTCTCGGCTAGACCCCGCCGACCTC
AACGCCAGGATGGGCAGTTACTTCACTGCACACGTGGCCAGCAGCGACCCCAGTGGATTG
GTGCCGATCGCGTTGGACGGCAAGATGCTGCGTGGTGCTTTACGCGCCAAAGCGACAGCC
ACGCATCTCGTGTCGGTGTTCGCCCACCGTGCCCGATTGGTGCTCGGTCAACTCGCTGTC
GCCGAGAAAAGCAATGAAATTCCCTGCGTATGTGCCCTGCTCACGCTGCTGCCGGATAAC
TTGCGGTGGCTGGTCACCGTGGATGCGATGCATACCCAGGTCGTCACCGCGAAGTTGATC
TGCGCCACCTTGAAGTCGCACTACCTGATGATCGTCAAGTCCAACCAAGCCAAAATACTT
GCCCGTATCACCGCGCTGCCCTGGGCCGAGGTGCCCGCAGCCGCTACCGACGACTCCCGC
GGCCACGGCCGTGTCGAGACCCGCACCCTGCAAATCATCACCGCTGCACGAGGAATCGGC
TTCCCCTACGCAAAACAAATCATCCGGATCACTCGTGAACGCTTGATCACCGCCACCGAC
CAGCGCAGCGTGGAGGTGGTCTATGCCATCTGCAGCCTGCCGTTCGAGCACGCCCGCCCT
ACCGCGATCATGACCTGGATGCGTCAACACTGCGGAATCGAGAACAGCCTGCACTGGATA
CGCGACGTCACCTTCGACGAAGACCGTCACAGGGCACATACCGGAAACGGCGCACAGGTC
CTAGCAACGCTACGCAACACCGCGATCAATCTGCACCGCCTCAACGGCGCCGACAACATC
GCCGAAGCCTGCCGGATCACCGCTTTGACCGCCAACCGCCGCCTAGACCTCCTCAATCCA
CAATTCCCCAGCTCACAAGCCTGCTAA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR002559 Transposase, IS4-like (Domain) PF01609 DDE_Tnp_1
SignalP	Bacteria, Gram-positive Eukaryota Bacteria, Gram-negative
TMHMM	No significant hit

MUP_00580 MUP_00600