Nidda_00050 : CDS information
Location
Organism | Streptomyces caelestis |
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Strain | NRRL 2821 |
Entry name | Niddamycin |
Contig | AF016585 |
Start / Stop / Direction | 30,294 / 35,003 / + [in whole cluster] 30,294 / 35,003 / + [in contig] |
Location | 30294..35003 [in whole cluster] 30294..35003 [in contig] |
Type | CDS |
Length | 4,710 bp (1,569 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase |
Product (GenBank) | polyketide synthase module 6 |
Gene | |
Gene (GenBank) | nidA4 |
EC number | |
Keyword | |
Note | |
Note (GenBank) |
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Reference |
PKS/NRPS Module
6 | hydroxylmalonyl-CoA or methoxymalonyl-ACP |
Sequence
>polyketide synthase [polyketide synthase module 6] MENEAPKESNEPDAAKLRSYLRRVTAELHRATEQLRAVEERAREPIAIVGMACRLPGGVR GPEDLWELLRSETDAVSPAPSDRGWDVTAMYSPDPDRPGTTYCREGGFVRGVDRFDPGLF GISPNEALAMDPQQRLLLETVWESLERAGIDPKSLRGSRTGVFAGAWESGYQKGLDAADA GLEAQLLAGIVSFTAGRVSYTLGLEGPAMTVDTACSSSLVALHLAVQSLRRRECDLALAG GATVIADPALLVQFSRQRALAPDGRCKAFAEAADGFGPAEGAGMLLVERLSDAERLGHRV LAVVRGTAVNQDGASNGLTAPSGPAQQKVIRDALADAGLRADDIDAVEAHGTGTPLGDPI EAGALLATYGHPERRKPLWLGSLKSNIGHTQAAAGVAGIIKMVQALRHDTLPRTLHADHP SSKVDWDAGPLRLLTDARPWPADPDRPRRAGISSFGVSGTNAHVVLEEPPASEEAPPPPP ATSPMTVLPLSAAGAVSLREQARRLADHLDAHPEITPADAAYSAATTRAALSHRASVPAG DRESLIARLRSVAEERPEPDVVLGEAGSDRAPAFVFPGQGAQWAGLGARLLADSPVFRAR AEACARALEPHLDWSVLDVLAGAPGTPPIDRADVVQPVLFTTMVSLAALWEAHGVRPAAV VGHSQGEVAAACVAGALSLDDAALVIAGRSRLWGRLAGNGGMLAVMAPAERIRELLEPWR QRISVAAVNGPASVTVSGDALALEEFGARLSAEGVLRWPLPGVDFAGHSPQVEEFRAELL DLLSGVRPAPSRIPFFSTVTAGPCGGDQLDGAYWYRNTREPVEFDATVRALLRAGHHTFI EVGPHPLLNAAIDEIAADEGVAATALHTLQRGAGGLDRVRNAVGAAFAHGVRVDWNALFE GTGARRVPLPSYAFHRDRFWLPTAAARRPATSSSRPTDAWRYRVTWTALETPAGNGRLTG RWLVIWSRNGDPLLPDITTALHTAGADTHTLTLDPTTTDKDTLATHLTHIATAHPDGLSG ILLAPTPVTPDPHQPPLDPATTLTLTTIQALTTTPLTTPLWITTRQATTIHPTDTPNPYT ARLWGLGQTAALEHPQHWGGLIDLPEHPTPHHLHHLTTHLATSQDPNPRQPHEDQIAIRT HTTYARRLTPTTPTTTPTPWTPPPGTILITGGTGALGTHIATWLAHKGAKHLILTSRQGP NAPGATQLQHHLTQLGTHTTITPCDLTDPQQIENLINHINTHHPPLQAIFHTAGTPQTTP LTHLTPTQATDILNAKTTGAELLHHHTTHTPLHTVVHFSSAAATWGSSGQSLYAAANAHL DALAQHTHTQGQPTTSIAWGLWGGGGMGESPEVVDYYAKRGLSPMRPESAIEALERALSL GDTCVTVADVDWKRFAAGYTAYRPSRLISDIPEIRDLQASAPVVDKSGELTERLNAALTP RERNKILVELVRSVAAEVLGHDGTDRIGHDVAFKDLGFDSLAAVKMRTRLRETTGLDLPA TVIFDHPTVDRLAAMLLAERTDPSGPTGPADRPGAAAPVPEPRPAADAGEIDALSPAELI RLAKTGAGQ
>polyketide synthase [polyketide synthase module 6] GTGGAGAACGAAGCTCCGAAGGAGTCGAACGAGCCGGACGCGGCGAAGCTGCGCTCCTAC CTCAGGCGCGTGACGGCCGAGCTGCACCGGGCCACCGAGCAACTGCGGGCCGTCGAGGAG CGGGCGCGGGAACCGATCGCGATCGTCGGCATGGCCTGCCGGCTGCCCGGCGGGGTGCGC GGGCCGGAGGACCTGTGGGAGCTGCTGCGCTCGGAGACCGACGCCGTCTCCCCGGCACCG TCCGACCGCGGCTGGGACGTGACGGCGATGTACTCGCCCGACCCGGACCGGCCGGGGACG ACGTACTGCCGCGAGGGGGGATTCGTCCGGGGAGTCGACCGGTTCGACCCCGGCCTGTTC GGGATCTCTCCGAACGAGGCACTGGCCATGGACCCCCAGCAGCGGCTCCTGCTGGAGACG GTGTGGGAATCGCTGGAACGGGCCGGCATCGACCCGAAGTCGTTACGGGGCAGCCGCACC GGGGTGTTCGCCGGTGCCTGGGAGAGCGGCTACCAGAAGGGGCTGGACGCGGCCGACGCG GGGCTGGAGGCCCAGCTCCTGGCCGGGATCGTCAGTTTCACGGCGGGCCGGGTCTCGTAC ACCCTGGGTCTCGAGGGTCCCGCCATGACGGTGGACACGGCGTGTTCGTCGTCGCTGGTG GCGCTGCATCTCGCGGTGCAGTCGCTGCGCCGCCGCGAGTGCGACCTCGCCCTCGCCGGC GGTGCGACGGTCATCGCCGACCCCGCCCTCCTCGTGCAGTTCTCGCGGCAGCGGGCGCTG GCGCCGGACGGCCGCTGCAAGGCCTTCGCCGAGGCCGCCGACGGTTTCGGGCCCGCCGAG GGTGCCGGGATGCTGCTGGTGGAGCGGCTCTCCGACGCCGAGCGGCTCGGCCACCGCGTG CTGGCCGTCGTGCGTGGCACCGCCGTCAACCAGGACGGCGCCAGCAACGGCCTCACCGCC CCCAGCGGACCCGCCCAGCAGAAGGTCATCCGCGACGCCCTGGCCGACGCCGGCCTCCGC GCCGACGACATCGACGCCGTCGAGGCCCACGGCACCGGCACCCCCCTCGGCGACCCCATC GAAGCCGGCGCCCTGCTGGCCACCTACGGACACCCCGAACGCCGGAAACCGCTCTGGCTG GGGTCGCTGAAGTCCAACATCGGCCACACCCAGGCCGCCGCCGGCGTCGCCGGAATCATC AAGATGGTGCAGGCGCTGCGGCACGACACCCTGCCGCGCACCCTCCACGCCGACCATCCC AGCAGCAAGGTCGACTGGGACGCCGGCCCGCTTCGGCTCCTGACCGACGCCCGGCCCTGG CCCGCCGACCCCGACCGGCCGCGCCGCGCCGGTATCTCCTCGTTCGGCGTCAGCGGCACC AACGCCCACGTCGTGCTCGAAGAACCACCGGCCTCGGAGGAAGCACCTCCGCCGCCCCCG GCCACGTCTCCGATGACCGTCCTCCCTCTGTCGGCCGCCGGGGCGGTATCCCTGCGCGAG CAGGCCCGGCGGCTCGCCGATCATCTCGACGCCCATCCGGAGATCACGCCGGCCGATGCC GCGTACTCCGCCGCCACCACCCGCGCGGCGCTCTCCCACCGGGCCTCGGTCCCGGCGGGC GACCGTGAGTCGCTGATCGCGCGGCTGCGCTCGGTCGCGGAGGAGCGGCCGGAGCCCGAC GTCGTGCTCGGTGAGGCCGGCAGCGACCGCGCGCCTGCCTTCGTCTTTCCCGGGCAGGGC GCCCAGTGGGCCGGACTGGGAGCGCGGCTCCTCGCGGACTCCCCCGTCTTCCGCGCCAGG GCCGAGGCATGCGCGCGGGCGCTGGAGCCTCACCTCGACTGGTCGGTCCTCGACGTGCTG GCCGGCGCCCCGGGCACCCCTCCCATCGACCGGGCCGACGTGGTGCAGCCGGTGCTGTTC ACCACGATGGTCTCGCTGGCCGCCCTCTGGGAGGCCCACGGGGTGCGGCCGGCCGCGGTC GTGGGCCACTCCCAGGGCGAGGTGGCCGCGGCCTGCGTGGCCGGTGCCCTGTCGCTGGAC GACGCTGCCCTGGTGATCGCCGGACGCAGCAGGCTGTGGGGGCGGCTGGCCGGGAACGGC GGGATGCTCGCGGTGATGGCTCCGGCCGAGCGGATCCGTGAGCTGCTCGAACCATGGCGG CAGCGGATTTCGGTGGCGGCGGTCAATGGCCCCGCCTCGGTCACCGTCTCCGGTGACGCG CTCGCGCTGGAGGAGTTCGGCGCGCGGCTCTCCGCCGAGGGGGTGCTGCGCTGGCCGCTG CCGGGCGTCGACTTCGCCGGCCACTCGCCGCAGGTGGAGGAGTTCCGCGCTGAGCTCCTG GACCTGCTCTCCGGCGTACGGCCGGCTCCTTCGCGGATACCTTTCTTCTCCACCGTGACG GCGGGTCCTTGCGGCGGCGACCAGCTGGACGGGGCGTACTGGTACCGCAACACGCGCGAA CCCGTGGAGTTCGACGCCACGGTCCGGGCGCTGCTGCGTGCGGGCCATCACACGTTCATC GAGGTCGGTCCGCATCCGCTGCTCAACGCCGCGATCGACGAGATCGCAGCGGACGAGGGG GTAGCGGCCACGGCCCTGCATACGCTCCAGCGGGGCGCTGGCGGCCTTGACCGCGTGCGC AACGCGGTGGGCGCCGCTTTCGCGCACGGTGTCCGGGTCGACTGGAACGCCCTGTTCGAG GGCACCGGTGCGCGCAGGGTGCCGCTTCCCTCGTACGCCTTCCATCGTGACCGGTTCTGG CTGCCGACCGCTGCCGCCCGGCGGCCCGCGACGTCGTCGTCCCGGCCCACGGACGCCTGG CGTTACCGGGTGACCTGGACGGCTCTGGAAACTCCGGCCGGCAACGGGAGGCTGACAGGT CGTTGGCTGGTGATCTGGTCACGGAACGGGGACCCCCTCCTCCCCGACATCACCACCGCC CTGCACACCGCGGGCGCCGACACCCACACCCTCACCCTCGACCCCACCACCACCGACAAA GACACACTCGCCACCCACCTCACCCACATCGCCACCGCCCACCCCGACGGCCTCAGCGGC ATCCTCCTCGCCCCCACCCCCGTCACACCCGACCCCCACCAACCCCCACTCGACCCCGCC ACCACCCTCACCCTCACCACCATCCAAGCCCTCACCACAACCCCCCTCACCACCCCCCTG TGGATCACCACCCGCCAAGCCACCACCATCCACCCCACCGACACCCCCAACCCCTACACC GCACGCCTCTGGGGACTCGGCCAGACCGCCGCCCTCGAACACCCCCAACACTGGGGCGGG CTCATCGACCTACCCGAACACCCCACACCCCACCACCTCCACCACCTCACCACCCACCTC GCCACCAGCCAAGACCCCAACCCCCGACAACCCCACGAAGACCAAATCGCCATCCGCACC CACACCACCTACGCCCGCCGACTCACCCCCACCACACCCACCACCACACCCACCCCCTGG ACCCCACCCCCCGGCACCATCCTCATCACCGGCGGCACCGGCGCCCTCGGCACCCACATC GCCACCTGGCTCGCCCACAAAGGCGCCAAACACCTCATCCTCACCAGCCGCCAAGGACCC AACGCCCCCGGCGCCACCCAACTCCAACACCACCTCACCCAACTCGGCACCCACACCACC ATCACCCCCTGCGACCTCACCGACCCCCAACAAATCGAAAACCTCATCAACCACATCAAC ACCCACCACCCACCCCTCCAAGCCATCTTCCACACCGCCGGAACCCCCCAGACCACCCCA CTCACCCACCTCACCCCCACCCAAGCCACCGACATCCTCAACGCCAAAACCACCGGCGCC GAACTCCTCCACCACCACACCACCCACACCCCCCTCCACACCGTCGTCCACTTCTCCTCC GCCGCCGCCACCTGGGGCAGCAGCGGACAATCCCTCTACGCCGCCGCCAACGCCCACCTC GACGCCCTCGCCCAACACACCCACACCCAAGGCCAACCCACCACCTCCATCGCCTGGGGA CTGTGGGGAGGCGGCGGGATGGGCGAGTCCCCCGAGGTCGTGGACTACTACGCCAAGCGC GGGCTGTCGCCGATGCGGCCCGAGTCGGCCATCGAGGCCCTGGAACGCGCACTGTCGCTG GGGGACACCTGCGTCACGGTGGCCGACGTCGACTGGAAGCGCTTCGCCGCGGGATACACC GCCTACCGGCCCAGCCGGCTGATCTCCGACATCCCCGAGATCCGCGATCTGCAGGCGTCC GCACCGGTCGTCGACAAGTCCGGGGAATTGACCGAGCGGCTGAACGCCGCCCTGACCCCA CGTGAGCGGAACAAGATCCTCGTGGAACTGGTCCGTTCCGTCGCCGCCGAGGTCCTGGGG CATGACGGCACCGACCGCATCGGCCACGACGTGGCCTTCAAGGACCTCGGCTTCGACTCG CTGGCCGCGGTCAAGATGCGTACGAGGCTGCGCGAGACGACCGGGCTCGACCTGCCCGCG ACGGTCATCTTCGACCACCCCACCGTGGACCGTCTCGCCGCGATGCTGCTCGCCGAGCGG ACGGACCCGTCCGGGCCGACGGGACCGGCCGACCGCCCTGGCGCCGCGGCACCCGTCCCG GAGCCTCGCCCCGCCGCCGACGCCGGTGAGATCGACGCGCTCAGCCCCGCGGAACTCATC CGGCTCGCGAAGACCGGAGCCGGACAATGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001227 Acyl transferase domain (Domain)
IPR006162 Phosphopantetheine attachment site (PTM)
IPR009081 Acyl carrier protein-like (Domain)
IPR013968 Polyketide synthase, KR (Domain)
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR014043 Acyl transferase (Domain)
IPR015083 Polyketide synthase, docking (Domain)
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase (Domain)
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR016040 NAD(P)-binding domain (Domain)
IPR018201 Beta-ketoacyl synthase, active site (Active_site)
IPR020801 Polyketide synthase, acyl transferase domain (Domain)
IPR020806 Polyketide synthase, phosphopantetheine-binding domain (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
IPR020842 Polyketide synthase/Fatty acid synthase, KR (Domain)
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SignalP | |
TMHMM | No significant hit |