Rapam_00240
Rapam_00250 : CDS information
Location
| Organism | Streptomyces rapamycinicus |
|---|---|
| Strain | NRRL 5491 |
| Entry name | Rapamycin |
| Contig | X86780 |
| Start / Stop / Direction | 103,788 / 102,427 / - [in whole cluster] 103,788 / 102,427 / - [in contig] |
| Location | complement(102427..103788) [in whole cluster] complement(102427..103788) [in contig] |
| Type | CDS |
| Length | 1,362 bp (453 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative major facilitator superfamily transporter |
| Product (GenBank) | membrane transport protein |
| Gene | |
| Gene (GenBank) | orfF |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Family/Domain |
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Sequence
>putative major facilitator superfamily transporter [membrane transport protein] MSRHSPAPSAWRRIQTAWGLPDLAGKGRFVTANLIDSLGNGLVMAFTVVFFVKTTSLSLV AVGAALTAGQLLALPVPPFIGSLLDKYGPRIVVAAGNWISVGGFIGFLFSHAAWQIVLWQ FVVQLGSTAFWMGHSPLIVLVARGVERARWFGFVRALRNVGVGFGGAASAVALSIGTVTW LRAVMVINVVTFAVAGWLVITFRGADGSGAADAGPAEAKPAEPERAAGEATGQPSGGFRT VLKDTRYLRLVATNIAFAFASTVVAVLLAVYVADNLAVGSWIVGVLVVLNTVMVALLQTL ASRWIEARRPAAVLVLALLFNAAAFAVFGTLLVLPGWAVIAGLLIAMVLYTVGEILGSPP TSELSVVMAPEHLRGRYLGVYQLSWSVGGAVAPALLTALLEGGAALPWVFLTAISVLAVP LVLGLDRRPAATSEAAPAGDAASVEQLDGGPVG
>putative major facilitator superfamily transporter [membrane transport protein] ATGTCGCGGCATTCCCCCGCGCCTTCGGCGTGGCGGCGGATTCAGACGGCCTGGGGTCTG CCGGACCTCGCGGGAAAGGGCCGCTTCGTCACGGCCAATCTGATCGACAGCCTGGGCAAC GGGTTGGTGATGGCGTTCACCGTCGTCTTCTTCGTGAAGACGACGTCGCTGTCACTGGTC GCCGTCGGCGCCGCGCTGACCGCCGGACAGCTGCTCGCCCTGCCCGTTCCGCCCTTTATC GGGTCCCTGTTGGACAAATACGGTCCGCGTATCGTGGTCGCTGCGGGCAACTGGATTTCG GTGGGCGGATTCATCGGTTTCCTGTTCTCGCACGCGGCCTGGCAGATCGTGCTGTGGCAG TTCGTGGTGCAACTGGGTTCCACCGCCTTCTGGATGGGCCACAGTCCGCTCATCGTGCTG GTCGCCCGGGGCGTCGAGCGGGCCCGCTGGTTCGGCTTCGTGCGTGCCCTCCGCAATGTC GGCGTCGGTTTCGGCGGCGCCGCGTCCGCGGTGGCCCTGAGCATCGGAACCGTCACCTGG CTGCGGGCGGTGATGGTGATCAACGTGGTCACCTTCGCCGTCGCGGGCTGGCTCGTGATC ACCTTCCGGGGCGCGGACGGGAGCGGGGCGGCCGATGCCGGCCCCGCGGAGGCGAAGCCC GCCGAGCCGGAGCGGGCGGCGGGCGAAGCCACCGGACAACCCTCGGGCGGCTTTCGCACC GTACTGAAGGACACCCGGTATCTGCGGCTGGTCGCGACGAACATCGCCTTCGCCTTCGCC TCCACGGTGGTCGCGGTGCTGCTCGCCGTCTACGTGGCGGACAACCTCGCTGTCGGCTCC TGGATCGTCGGCGTGCTCGTCGTGCTGAACACGGTCATGGTCGCGCTGCTCCAGACGCTC GCCAGCCGGTGGATCGAGGCCCGCAGACCGGCGGCGGTGCTGGTGCTGGCCCTGCTGTTC AACGCGGCGGCGTTCGCCGTCTTCGGCACGCTGCTCGTGCTGCCCGGCTGGGCGGTGATC GCCGGGCTGCTGATCGCGATGGTGCTCTACACCGTGGGCGAGATCCTCGGCTCGCCGCCG ACCAGCGAACTGAGCGTGGTGATGGCGCCCGAGCATCTGCGGGGCCGCTATCTGGGCGTC TACCAGCTGTCCTGGTCGGTCGGCGGTGCCGTCGCCCCGGCGCTGCTCACAGCGCTGCTG GAGGGCGGTGCGGCGCTGCCCTGGGTGTTCCTCACCGCGATCAGCGTGCTGGCCGTACCG CTCGTGCTCGGGCTCGACCGGCGGCCCGCGGCCACGAGCGAGGCCGCACCGGCCGGGGAC GCCGCCTCCGTGGAGCAACTCGACGGCGGCCCCGTCGGCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP |  ![[1-1] Signal-anchor](../../img/M.gif "[1-1] Signal-anchor"){kind=small} |
| TMHMM | ![[30-52] Transmembrane (o-i)](../../img/G.gif "[30-52] Transmembrane (o-i)"){kind=small} ![[59-81] Transmembrane (i-o)](../../img/C.gif "[59-81] Transmembrane (i-o)"){kind=small} |
![[33-393] 2.2e-23 PF07690](../../img/H.gif "[33-393] 2.2e-23 PF07690"){kind=small}
![[1-433] 1.99999636034521e-40 SSF103473](../../img/B.gif "[1-433] 1.99999636034521e-40 SSF103473"){kind=small}
