Rapam_00270 : CDS information

Location

Organism	Streptomyces rapamycinicus
Strain	NRRL 5491
Entry name	Rapamycin
Contig	X86780
Start / Stop / Direction	105,445 / 106,608 / + [in whole cluster] 105,445 / 106,608 / + [in contig]
Location	105445..106608 [in whole cluster] 105445..106608 [in contig]
Type	CDS
Length	1,164 bp (387 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)
Gene
Gene (GenBank)	orfD
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q54311 PmId [7644502] The biosynthetic gene cluster for the polyketide immunosuppressant rapamycin. (Proc Natl Acad Sci U S A. , 1995) [8635730] Organisation of the biosynthetic gene cluster for rapamycin in Streptomyces hygroscopicus: analysis of genes flanking the polyketide synthase. (Gene. , 1996) comment [PMID: 7644502](1995) rapamycin生合成gene clusterの報告。配列解析。 ORF D: ? --- [PMID: 8635730](1996) PKS flanking genesの配列解析。配列DBに一致なし。

Sequence

>hypothetical protein
MGGAMTATTDTFADAIGGLGDTEWDRLADGRFYSSALWLRQCAFLEPGSVSGGLHVETPG
GGRAAIPVAAVTDEANPQLRWHDLLTARGLPAPEPGGLLIGQRRGYLAHLLTGEGTDRTE
AAAAVLDAVRALRSPLHEDSKIARVAMYLTTEDVRALRAAGVRTAPVALSTDAWIGIPPG
GYHAWLESLSAHRGRRIRSEVRKFERTGYEVEHRTLADCWQDVARLLARSLLRYGRTVDV
APIAESFREQGELAGSRAEVVLCSRAGEPPVGFCLYYRCGDTVYLRALGFDHDQLVSPAE
YFNLTYYTQVRLPGVRWLHAGTETAEGKALRGATLRPLWLLDLSEDSPLAGYDEEIREHN
RAMLDRLRDSSPAISDALEYELWKPYC

>hypothetical protein
ATGGGAGGCGCCATGACCGCCACGACGGACACTTTCGCCGACGCCATCGGCGGGCTCGGG
GACACCGAGTGGGACCGGCTCGCCGACGGCAGGTTCTACTCGTCGGCGCTGTGGCTGCGG
CAGTGCGCCTTCCTCGAGCCCGGGTCGGTCTCCGGCGGACTGCACGTGGAGACCCCGGGC
GGCGGCAGGGCCGCGATCCCCGTGGCGGCGGTGACCGACGAAGCCAACCCGCAGCTGCGG
TGGCACGACCTGCTGACCGCGCGCGGCCTGCCGGCGCCCGAGCCGGGCGGCCTGCTCATC
GGCCAGCGCCGCGGCTACCTGGCGCATCTGCTCACCGGCGAGGGAACCGATCGGACCGAG
GCCGCCGCCGCGGTGCTCGACGCGGTCCGCGCGCTGCGCTCCCCCCTGCACGAGGACTCG
AAGATCGCCCGCGTGGCGATGTACCTGACCACCGAGGATGTGCGGGCGCTGCGGGCGGCG
GGGGTGCGGACCGCCCCGGTCGCGCTGAGTACCGACGCCTGGATCGGGATCCCGCCCGGC
GGCTACCACGCCTGGCTGGAATCGCTGTCGGCGCACCGGGGCCGCCGTATCCGCAGCGAG
GTACGGAAGTTCGAGAGGACCGGATACGAGGTGGAGCACCGGACGCTCGCCGACTGCTGG
CAGGACGTCGCCCGGCTGCTGGCCCGTTCGCTACTGCGCTACGGCAGGACTGTCGACGTG
GCCCCGATCGCCGAGTCCTTCCGCGAGCAGGGTGAACTCGCCGGTTCGCGCGCCGAGGTG
GTGCTGTGCTCGCGCGCCGGCGAACCGCCCGTCGGCTTCTGCCTGTACTACCGATGTGGC
GACACCGTGTACCTGCGGGCGCTCGGCTTCGACCACGACCAACTCGTCTCGCCCGCCGAG
TACTTCAACCTCACCTATTACACGCAGGTACGGCTCCCGGGAGTGCGCTGGCTGCACGCG
GGCACCGAGACCGCGGAAGGAAAGGCACTGCGCGGCGCGACGCTCCGGCCGCTGTGGCTG
CTGGACCTGTCCGAGGACAGCCCGCTGGCCGGGTACGACGAGGAGATCCGCGAGCACAAT
CGCGCCATGCTCGACCGCCTGCGCGACTCCTCGCCCGCGATTTCCGACGCCCTGGAGTAC
GAGCTCTGGAAGCCGTACTGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR016181 Acyl-CoA N-acyltransferase (Domain) SSF55729 Acyl_CoA_acyltransferase
SignalP	No significant hit
TMHMM	No significant hit

Rapam_00260 Rapam_00280