Rifam_00130 : CDS information

Location

Organism	Amycolatopsis mediterranei
Strain	S699
Entry name	Rifamycin
Contig	AF040570
Start / Stop / Direction	11,944 / 12,981 / + [in whole cluster] 11,944 / 12,981 / + [in contig]
Location	11944..12981 [in whole cluster] 11944..12981 [in contig]
Type	CDS
Length	1,038 bp (345 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative integral membrane protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF31
Reference	ACC Q7BUE5 comment [PMID: 9512878, 9497318, 11278540] UniProtに登録されているこれらの論文には、図表を含め、このORFについての記述がない。その他にも記載論文なし。

Sequence

>hypothetical protein [putative integral membrane protein]
MPPSRRQPPRSTPSPSRRPRVAGLRKPPTDETAAERTGQLPAVPPAKPRPRPAPRPAPRP
AAKPAEPVESTSGQLDDLAPAEDTQVFAAVGTEVEEEPRVDALTGEPSADEEEAPARPAP
RRKKRDTGIAKPTEESEVPVSAADPEPEKRAGAKVPKTYLVAGALVLVALILGGLAFWFK
SEEVKVSSATSNTALLDVAKTAQVKDAVSKAAEALFSYDFNNIKKTEDAANDLLANDDVK
NKYNSLMGEVKRLAPAQKMIVTCKVTRAAVIMLNGDLAKVMVFVDQTSTRTDTKKTTAGT
AQLHLNAQLQGDKWKITDMDTYNAPKVPAASQAPASAPASPTPSK

>hypothetical protein [putative integral membrane protein]
GTGCCCCCCTCCCGCCGCCAGCCGCCGCGCAGCACCCCGTCGCCGTCGCGGCGTCCCCGC
GTGGCCGGGCTGCGCAAGCCCCCGACGGACGAGACCGCCGCCGAGCGGACCGGTCAGCTG
CCCGCCGTGCCGCCCGCGAAGCCGCGTCCGCGGCCGGCGCCGCGTCCGGCGCCCCGGCCG
GCCGCCAAGCCCGCCGAGCCGGTGGAGTCCACCAGCGGGCAGCTCGACGACCTGGCGCCG
GCCGAGGACACGCAGGTGTTCGCGGCGGTCGGCACCGAGGTCGAAGAGGAGCCGCGGGTC
GACGCGCTCACGGGGGAGCCATCGGCCGACGAGGAGGAGGCCCCGGCGCGGCCGGCGCCG
CGGCGGAAGAAGCGGGACACCGGGATCGCGAAGCCGACCGAGGAATCCGAGGTTCCGGTC
TCGGCTGCCGATCCGGAGCCGGAGAAGCGCGCGGGCGCGAAGGTGCCGAAGACGTACCTC
GTGGCGGGTGCGCTGGTGCTGGTCGCGCTGATCCTGGGCGGGCTGGCGTTCTGGTTCAAG
TCCGAAGAGGTCAAGGTCTCCTCGGCTACGAGCAACACGGCGCTGCTGGACGTCGCGAAG
ACCGCGCAGGTCAAGGACGCGGTGTCGAAGGCGGCCGAGGCGCTGTTCTCCTACGACTTC
AACAACATCAAGAAGACCGAGGACGCGGCGAACGACCTGCTCGCCAACGACGACGTCAAG
AACAAGTACAACTCGCTGATGGGCGAGGTGAAGCGGCTCGCGCCGGCCCAGAAGATGATC
GTGACGTGCAAGGTGACGCGCGCGGCGGTGATCATGCTGAACGGCGACCTGGCGAAGGTG
ATGGTCTTCGTCGACCAGACCTCGACCCGCACCGACACGAAGAAGACGACGGCGGGCACG
GCCCAGCTCCACCTGAACGCCCAGCTCCAGGGCGACAAGTGGAAGATCACCGACATGGAC
ACCTACAACGCCCCGAAGGTGCCGGCGGCGTCGCAGGCACCCGCGTCGGCGCCGGCTTCC
CCGACGCCGTCGAAGTAG

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro	No significant hit
SignalP	Bacteria, Gram-negative Bacteria, Gram-positive
TMHMM	Transmembrane 1

Rifam_00120 Rifam_00140