Rubra_00070 Rubra_00070   Rubra_00090 Rubra_00090

Rubra_00080 : CDS information

close this sectionLocation

Organism
StrainNRRL 3061 (=NBRC 14000)
Entry nameRubradirin
Contig
Start / Stop / Direction23,695 / 24,459 / + [in whole cluster]
23,695 / 24,459 / + [in contig]
Location23695..24459 [in whole cluster]
23695..24459 [in contig]
TypeCDS
Length765 bp (254 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.1 general function
Productputative acetyltransferase
Product (GenBank)putative 30S ribosomal protein modification
Gene
Gene (GenBank)rubR2
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[18080113] Biosynthesis of rubradirin as an ansamycin antibiotic from Streptomyces achromogenes var. rubradiris NRRL3061. (Arch Microbiol. , 2008)
comment
Rubradirin生合成clusterの報告。
RubR2(254aa): 30S Ribosomal protein modification

論文中に詳細な記述がない。
Family/Domain
FD
IPR000182
comment
[IPR000182] GCN5-related N-acetyltransferase (Domain)
function; N-acetyltransferase activity

close this sectionSequence

selected fasta
>putative acetyltransferase [putative 30S ribosomal protein modification]
MFVRLPGCSPYWSRQATDVDVAGAHQRHSWKATAINLKHPTPDPVITRVAEDQWHASDGD
LVVGSGDTGRRPDGRLYISIDAWHDTAFDRLAAAMLAELPAPLYTLVDADDADTISNWRR
AGFTPHRSERQYLLVPGEAQPAVSPPAGVTLTGGAEESRAEVEGVEVGVIRISPSMRDNG
RPRIARIRSIEVRADQRRRGIGRALLVHALDALHTREFGLATIDVDETDTATISLLESVG
ARRESNTLELTWQK
selected fasta
>putative acetyltransferase [putative 30S ribosomal protein modification]
ATGTTCGTTCGATTACCCGGGTGCTCCCCCTATTGGTCACGGCAGGCGACTGATGTAGAT
GTCGCGGGAGCGCACCAGAGGCACTCCTGGAAGGCGACAGCCATCAACCTTAAGCATCCC
ACCCCAGACCCCGTGATCACGCGGGTCGCCGAAGACCAGTGGCACGCCAGCGACGGCGAC
TTGGTTGTCGGCAGTGGCGACACGGGGCGCAGGCCCGACGGGCGACTGTACATCAGCATC
GACGCATGGCACGACACAGCCTTCGACCGGCTGGCCGCCGCCATGCTGGCGGAACTGCCG
GCGCCGCTCTACACGCTGGTCGACGCCGACGACGCGGACACGATCTCGAACTGGCGGCGG
GCCGGCTTCACCCCTCACCGAAGTGAGCGGCAGTACCTGCTGGTGCCCGGCGAAGCGCAG
CCCGCCGTGTCGCCCCCGGCGGGGGTGACGTTGACCGGCGGCGCGGAGGAGTCCCGCGCC
GAAGTCGAGGGGGTCGAAGTCGGTGTGATCCGGATTTCGCCGTCGATGCGGGACAACGGG
AGGCCGCGGATCGCGCGGATTCGCTCCATCGAGGTCCGCGCCGACCAGCGCCGCCGTGGC
ATCGGCAGGGCGCTGCTGGTCCACGCGCTGGACGCTCTGCACACTCGCGAGTTCGGTCTC
GCGACGATCGACGTCGACGAGACCGACACCGCGACGATCAGCCTGTTGGAAAGCGTCGGA
GCCCGCCGTGAGAGCAACACCTTGGAGCTGACGTGGCAAAAGTAA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR000182 GNAT domain (Domain)
[160-241] 8.10000000000001e-10 PF00583
PF00583   Acetyltransf_1
[102-254] PS51186
PS51186   GNAT
IPR016181 Acyl-CoA N-acyltransferase (Domain)
[107-244] 1.8e-12 G3DSA:3.40.630.30
G3DSA:3.40.630.30   Acyl_CoA_acyltransferase
[90-249] 6.69999687625999e-14 SSF55729
SSF55729   Acyl_CoA_acyltransferase
SignalP No significant hit
TMHMM No significant hit
Rubra_00070 Rubra_00070   Rubra_00090 Rubra_00090
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