Rubra_00190 : CDS information
Location
Organism | Streptomyces achromogenes var. rubradiris |
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Strain | NRRL 3061 (=NBRC 14000) |
Entry name | Rubradirin |
Contig | AJ871581 |
Start / Stop / Direction | 38,087 / 34,797 / - [in whole cluster] 38,087 / 34,797 / - [in contig] |
Location | complement(34797..38087) [in whole cluster] complement(34797..38087) [in contig] |
Type | CDS |
Length | 3,291 bp (1,096 aa) |
Annotation
Category | 5.4 hypothetical protein |
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Product | hypothetical protein |
Product (GenBank) | hypothetical protein |
Gene | |
Gene (GenBank) | Rub7 |
EC number | |
Keyword | |
Note | |
Note (GenBank) | |
Reference |
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Sequence
>hypothetical protein [hypothetical protein] MGTKMPDVNDLVDVATGDATVAETDVTLPGVLPLVLERVHRSSTRTGRWFGRSWTSSLDQ RLHVTGGQIHARFAGGQTLTFTSPGSAGDPPAVPVTGPAWPLRQNPDGSYAISDPQRGLT WRFERRPGYEDDELPLVSLTDRTGHEITFSYDAVGRPLSITHSGGYRVLVTVTDERITAL ALAGRGGQDDIPLRRFEYDDSGNLSGVVNSSGLPRRFTYDDMGRLTGWTDRNGYSYHYTF DSEGRCVRGEGPDGVLSGTFVYEPGVTRWTTTDGDVTTYAINESAHVVAVTDPIGKTTRT QYDERGRVTVRTDPLDRVTRHAYDERGNLVSVTDPAGHEYHVYVNDACLPERITAPDGTV WLQDFDKNGNLTEQTAPDGSVLTYAYDSRGHLSRMTGADGAVTTIACDPAGLPVAVTKPT GETIRYERDQLGRVVRVMSSDGGTTALTWTTDGLPTSRTLPDGSTDSWAWDGEENLQRRT SATGAVTSYAYGPFGQLMSITWPGGTRTELTYDRSCRVTSVTQSGMTWEFELESAGRLSA QTDYNGATTQYWYDAAGQLVHRVNASGHEASFAYNPLGKLAYSHTAEGTETTFAHDPAGR LVRAKNDDVDLVLVRDPLGRVITESCNGRTVTKTYDAAGRVTSRVTPSGASTSWSYDADG TPSLLTADGHELRFGHDPAGRETRRDLPGGVVLTQEWDHNGRLVTQALTGSAAASGPDGP VVTGQPLQRRAYTYSPDGSVAGRQDLLTGDRTFRLDSAGRVTAVTGRRDAWSEQYDFDPA GNIVDALWPAPAAGSAAGTPETSAQGPRATDGTLTTRAGDIRYRYDAAGRVVTRTRTRAS GDPDTWRYAWDADSRLHSVTLPDGSTWQYHYDPLGRRIGKRHLAADGRLLGQTQFTWDGD VLVEQEDRHGDCRKVTTWNYRNDSCVPLTQASRTVVRVDAEREETDEEFHSVVTDLNGMP TELVSPDGAVAGHQRYTWWGQSSWQHGTATTPLRFPGQYCDQETGLHYENQRYYDPEIGA YLSPDPLGLAPASNPHAYVPNTARLRTADSWIGSLLPSSHLLTVSAGVEGLDARLFAGGR AAGPHRAGEAELPELP
>hypothetical protein [hypothetical protein] GTGGGGACGAAGATGCCTGACGTCAACGATCTCGTGGACGTGGCGACCGGCGACGCCACT GTGGCCGAGACCGATGTCACGCTGCCCGGCGTCCTGCCCCTCGTGCTGGAGCGCGTCCAC AGGTCCTCCACCCGGACAGGCCGGTGGTTCGGACGGTCCTGGACGTCGAGCCTCGACCAG CGCCTGCACGTGACCGGCGGACAGATCCACGCGAGGTTCGCCGGCGGACAGACCCTGACC TTCACCTCTCCGGGCAGCGCCGGTGATCCCCCCGCTGTCCCGGTGACCGGCCCGGCATGG CCGCTGCGGCAGAACCCGGACGGCTCCTACGCCATCAGCGACCCGCAGCGCGGCCTCACC TGGCGGTTCGAACGCCGGCCCGGATACGAGGACGACGAACTGCCTCTGGTCTCGCTCACG GACCGGACGGGCCACGAGATCACCTTCAGCTACGACGCTGTCGGCAGGCCGCTCAGCATC ACCCACTCCGGCGGCTACCGCGTCCTGGTGACGGTCACCGACGAGCGCATCACCGCGCTG GCCCTCGCCGGCCGCGGCGGCCAGGACGACATCCCGCTGCGACGCTTCGAATACGACGAT TCCGGCAACCTGTCCGGCGTCGTCAATTCCTCCGGCCTGCCGCGGCGCTTCACTTACGAC GACATGGGTCGTCTGACCGGCTGGACCGACCGTAACGGCTACTCCTACCACTACACCTTC GACTCCGAAGGCCGGTGCGTCCGGGGAGAAGGCCCCGACGGTGTCCTGTCCGGCACCTTC GTCTACGAGCCCGGCGTCACTCGCTGGACCACCACCGACGGGGATGTCACCACCTACGCG ATCAACGAGTCCGCCCACGTCGTCGCGGTCACCGACCCGATCGGGAAGACGACGCGGACG CAGTACGACGAACGCGGCCGTGTCACCGTCCGCACCGACCCCCTCGACAGGGTCACTCGA CATGCCTACGACGAGCGCGGCAACCTGGTCTCGGTGACCGATCCGGCGGGCCACGAATAC CACGTCTACGTCAACGACGCCTGCCTCCCGGAACGGATCACCGCACCGGACGGAACTGTC TGGCTCCAGGATTTCGACAAGAACGGCAATCTCACCGAACAGACCGCACCCGACGGCTCG GTGCTCACCTACGCGTACGACAGCCGCGGGCACCTCAGCCGGATGACCGGCGCGGACGGC GCGGTCACCACGATCGCATGCGATCCGGCCGGATTGCCCGTGGCCGTCACCAAACCCACC GGTGAAACGATCCGGTACGAGCGCGACCAGCTGGGACGAGTCGTGCGTGTCATGAGCTCC GACGGCGGGACGACGGCCCTCACCTGGACGACGGACGGCCTCCCCACCTCCCGGACCCTG CCGGACGGGTCGACCGACTCCTGGGCCTGGGACGGCGAGGAGAACCTCCAGCGGCGAACC TCCGCCACGGGAGCGGTCACGTCATACGCCTACGGGCCATTCGGTCAACTGATGTCGATC ACCTGGCCGGGTGGCACCCGCACCGAGCTCACGTACGACCGCAGCTGTCGTGTCACCTCG GTGACCCAATCCGGGATGACGTGGGAATTCGAGCTGGAGTCCGCCGGCCGGCTGAGCGCG CAGACCGACTACAACGGAGCCACCACCCAGTACTGGTACGACGCCGCAGGACAGCTCGTA CACCGCGTGAACGCCAGCGGCCATGAGGCCTCGTTCGCCTACAACCCCCTGGGCAAGCTG GCGTATTCGCACACCGCAGAGGGCACGGAGACGACGTTCGCGCACGATCCGGCAGGCCGC CTCGTGCGGGCGAAGAACGACGACGTGGACCTGGTCCTCGTCAGGGACCCGCTCGGACGG GTGATCACCGAAAGCTGCAACGGCCGCACGGTCACCAAGACCTACGACGCGGCCGGAAGG GTGACGAGCCGCGTCACTCCGTCCGGGGCCAGTACGTCGTGGTCCTACGACGCGGACGGA ACGCCCTCGCTCCTCACCGCCGACGGCCATGAACTGCGCTTCGGCCATGACCCCGCCGGA CGGGAAACCCGCCGGGACCTGCCCGGGGGAGTAGTCCTCACCCAGGAGTGGGACCACAAC GGTCGTCTCGTGACGCAGGCGCTCACCGGCTCGGCCGCCGCCTCCGGTCCGGACGGACCC GTGGTCACGGGGCAACCGCTCCAACGGCGCGCGTACACCTACAGCCCGGACGGGTCCGTC GCGGGCCGGCAGGACCTGCTCACCGGCGACCGGACGTTCCGTCTCGACTCCGCCGGGCGG GTCACCGCAGTGACCGGCCGGCGTGACGCATGGTCGGAACAGTACGACTTCGATCCCGCG GGCAACATCGTCGACGCCCTCTGGCCGGCCCCGGCAGCCGGTTCTGCCGCCGGAACACCG GAGACGTCAGCGCAAGGGCCCCGCGCGACCGACGGAACCCTCACCACGCGGGCCGGCGAC ATCCGCTACCGCTACGACGCCGCCGGGCGCGTCGTCACGCGGACGCGGACACGGGCATCC GGCGATCCCGACACCTGGCGCTATGCGTGGGACGCCGACAGCCGGCTCCACTCCGTCACC CTCCCCGACGGAAGCACGTGGCAGTATCACTACGATCCCCTCGGCCGCCGCATCGGCAAG CGTCATCTCGCCGCCGACGGCCGGCTCCTGGGACAGACACAGTTCACGTGGGACGGGGAC GTCCTCGTCGAGCAGGAGGACCGCCACGGCGACTGCCGGAAAGTCACCACATGGAACTAC CGCAACGACTCGTGCGTCCCGCTCACCCAGGCCTCACGAACCGTCGTCCGCGTGGACGCC GAAAGGGAGGAGACCGACGAGGAGTTCCACTCCGTCGTCACGGACCTGAACGGCATGCCG ACCGAACTGGTCTCCCCCGACGGAGCCGTCGCCGGCCACCAGCGGTACACGTGGTGGGGG CAATCCTCCTGGCAGCACGGCACCGCGACCACACCGCTGCGCTTTCCCGGCCAGTACTGC GACCAGGAAACAGGACTGCACTACGAAAACCAGCGCTACTACGACCCCGAGATCGGCGCC TACCTCTCACCCGACCCCCTCGGGCTGGCGCCCGCGTCGAACCCTCACGCCTACGTCCCG AACACGGCGCGGCTGAGGACAGCGGACAGCTGGATCGGTTCTCTGCTCCCCTCCTCCCAT CTCCTGACGGTTTCCGCAGGCGTCGAGGGCCTCGACGCGCGCCTGTTCGCGGGCGGCCGG GCCGCCGGCCCCCACCGCGCAGGCGAAGCCGAACTCCCCGAACTCCCGTAG
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR006530 YD repeat (Repeat)
IPR015943 WD40/YVTN repeat-like-containing domain (Domain)
IPR022385 Rhs repeat-associated core (Domain)
|
SignalP | No significant hit |
TMHMM | No significant hit |