Rubra_00450 : CDS information

Location

Organism	Streptomyces achromogenes var. rubradiris
Strain	NRRL 3061 (=NBRC 14000)
Entry name	Rubradirin
Contig	AJ871581
Start / Stop / Direction	85,136 / 85,948 / + [in whole cluster] 85,136 / 85,948 / + [in contig]
Location	85136..85948 [in whole cluster] 85136..85948 [in contig]
Type	CDS
Length	813 bp (270 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative hydroxylase
Gene
Gene (GenBank)	rubP4
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q2PC45 PmId [18080113] Biosynthesis of rubradirin as an ansamycin antibiotic from Streptomyces achromogenes var. rubradiris NRRL3061. (Arch Microbiol. , 2008) comment Rubradirin生合成clusterの報告。 Table1>配列比較からの推定機能 RubP4(270aa): Hydroxylase 本文に記載なし。
Related Reference	ACC Q2PC57 NITE Rubra_00330 PmId [18080113] Biosynthesis of rubradirin as an ansamycin antibiotic from Streptomyces achromogenes var. rubradiris NRRL3061. (Arch Microbiol. , 2008) comment 2nd, id98%, 1e-150 Rubradirin生合成cluster内homolog [Rubra_00330]hypothetical protein RubP3(270aa): Hydroxylase rubransarolのmorpholine環形成のための様式は不明なままだが、rubF4 to rubF7 and rubP3 genesがこの過程で役割を果たすかもしれない。

Sequence

>hypothetical protein [putative hydroxylase]
MSVLVTGAYGDVGSHVVAGLLSAGVPVRGTSRTPRTGESPDGVEMVRLDLDEPETWPAAL
DGVKKVFLYAHADRVADFAGAARAAGVEHIVLLSSAAVVDPATRHSRSAVMHSAVEEALR
ESGIAWTFLRPTTFATKQLHLAPAIRSGEVLRIPFLQAPTASIHERDIADAAVCALTGAG
HEGKGYWLTGPQALTQQEHIEVIAAVTGRPIEVVDLAPEDAEPKLPEFFIRIMTELMNNP
CVVTPAVEEITGVPARSFRQWAEDHIKDFS

>hypothetical protein [putative hydroxylase]
TTGTCCGTTCTTGTCACTGGTGCGTACGGCGATGTCGGCAGCCATGTGGTGGCCGGGCTG
TTGTCTGCCGGAGTCCCGGTCCGCGGGACCAGCCGGACGCCGCGCACCGGCGAGTCGCCG
GATGGCGTCGAGATGGTCCGCCTCGACCTGGACGAGCCGGAGACCTGGCCGGCGGCGCTC
GACGGCGTCAAGAAGGTCTTCCTGTACGCCCATGCGGACCGTGTCGCCGATTTCGCCGGT
GCGGCGCGGGCTGCCGGGGTGGAGCACATCGTGCTGCTGTCCTCGGCCGCCGTGGTCGAT
CCCGCCACCCGGCACAGCCGCAGCGCGGTGATGCACTCCGCGGTGGAGGAAGCGCTCCGG
GAATCCGGGATCGCCTGGACGTTCCTGCGTCCCACCACCTTCGCCACGAAACAGCTTCAC
CTGGCGCCGGCGATCCGGTCCGGGGAAGTACTGCGGATTCCCTTCCTGCAAGCCCCCACC
GCGTCGATCCACGAACGCGACATCGCCGACGCGGCGGTCTGCGCGCTGACCGGTGCCGGG
CACGAGGGGAAGGGGTACTGGCTGACCGGGCCGCAGGCCCTGACGCAGCAGGAGCACATC
GAGGTGATCGCAGCGGTGACCGGGCGGCCGATCGAGGTGGTCGACCTGGCTCCCGAGGAC
GCCGAGCCCAAGCTCCCGGAGTTCTTCATCCGGATCATGACCGAACTCATGAACAATCCG
TGCGTCGTGACACCCGCCGTCGAGGAGATCACCGGAGTGCCGGCCCGCTCGTTCCGGCAG
TGGGCCGAGGACCACATCAAGGACTTCAGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR016040 NAD(P)-binding domain (Domain) G3DSA:3.40.50.720 NAD(P)-bd
SignalP	No significant hit
TMHMM	No significant hit

Rubra_00440 Rubra_00460