Rubra_00570 : CDS information

Location

Organism	Streptomyces achromogenes var. rubradiris
Strain	NRRL 3061 (=NBRC 14000)
Entry name	Rubradirin
Contig	AJ871581
Start / Stop / Direction	101,614 / 100,355 / - [in whole cluster] 101,614 / 100,355 / - [in contig]
Location	complement(100355..101614) [in whole cluster] complement(100355..101614) [in contig]
Type	CDS
Length	1,260 bp (419 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative secreted protein
Gene
Gene (GenBank)	rubC5
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q2PC33 PmId [18080113] Biosynthesis of rubradirin as an ansamycin antibiotic from Streptomyces achromogenes var. rubradiris NRRL3061. (Arch Microbiol. , 2008) comment Rubradirin生合成clusterの報告。 Table1>配列比較からの推定機能 RubC5(431aa): Putative secreted protein, monooxygenase rubC1-C5はAMC and DHDP biosynthesisに関連するとの記述はあるが、RubC5については詳細記載なし。

Sequence

>hypothetical protein [putative secreted protein]
MVPRRHAVVIGAGLTGLLAAKVLTEAFTWVTVLEREQVTGGADALDRLPDGRRVCVLAPL
FGDLVEQLLPGFMDLLRAQGAAAGDILSDVRWYLGGQPLRQRETGLTGLSVSQAFLEGVL
RRVLLQCPGVGIVDSCDVTGLMATADGRRVTGVRVHPCGEREQGVDADLVVDASGEASHL
AWLTRLGVAPPRPDTVHLGVSEVVRRYRLPVGVLEGDLAVVVAPTCAVPRSGCLVREERG
RWALSLGSLVGDLPRLGDDRSLLRFAGGLAAGDIREVLGEAEPLGEPAFPYVSGRVCFRY
GSARGLPSGLLLMGLGCVHGDLVGSRAATVAALEALVLREFLGAGGTVSGYRFHHRAWRL
RDRIFARTHAYIPRFSVTLRHLPLSLRLRHRLLDRVVQAAVCDAEAALRLLGAYGLVRW

>hypothetical protein [putative secreted protein]
GTGGTCCCGCGACGGCATGCGGTGGTGATCGGCGCCGGGCTGACCGGTCTGCTGGCCGCG
AAGGTGCTCACCGAGGCATTCACATGGGTGACGGTCCTGGAACGGGAACAGGTGACGGGC
GGCGCCGACGCGTTGGACCGTCTGCCGGACGGGCGCCGTGTCTGCGTGCTGGCGCCATTG
TTCGGCGACCTCGTCGAGCAACTGCTTCCCGGGTTCATGGACCTGCTGCGCGCGCAGGGC
GCCGCGGCCGGCGACATCCTGTCCGACGTCCGCTGGTACCTGGGCGGACAACCGCTCAGA
CAGCGGGAGACCGGGCTGACGGGCCTGTCGGTGAGCCAGGCCTTCCTGGAGGGCGTCCTG
CGGCGCGTGCTGCTGCAGTGCCCGGGCGTCGGCATCGTCGACAGCTGCGATGTCACCGGC
CTGATGGCGACGGCCGACGGCCGCCGGGTGACCGGTGTCCGCGTCCACCCCTGCGGCGAA
CGGGAACAGGGCGTCGACGCCGACCTTGTGGTGGATGCCTCGGGCGAGGCCTCGCACCTG
GCATGGCTGACCCGGCTGGGCGTCGCCCCGCCGCGTCCCGACACCGTCCATCTCGGTGTG
AGTGAGGTTGTTCGGCGTTACAGGTTGCCTGTGGGTGTGCTTGAGGGTGATTTGGCTGTG
GTGGTGGCTCCTACGTGTGCTGTGCCGCGTTCGGGTTGTCTGGTGCGTGAGGAGCGGGGT
CGTTGGGCTTTGAGTCTGGGTAGTTTGGTGGGTGATTTGCCGCGTTTGGGTGACGACCGG
TCTTTGCTTCGGTTTGCCGGGGGTCTTGCGGCTGGGGATATTCGTGAGGTGCTGGGTGAG
GCGGAGCCGCTTGGTGAGCCTGCGTTCCCGTATGTGTCTGGGCGTGTGTGCTTTCGGTAT
GGCAGTGCTCGTGGTCTGCCTTCCGGGCTGTTGCTGATGGGTTTGGGTTGTGTCCACGGG
GATCTGGTCGGTTCGCGGGCTGCGACTGTTGCGGCTTTGGAGGCGTTGGTCCTGCGTGAG
TTCCTCGGTGCGGGGGGCACGGTTTCCGGGTACCGGTTCCATCATCGGGCCTGGCGTTTG
AGGGACCGGATTTTTGCCCGGACGCATGCTTATATTCCCCGGTTTTCTGTCACTTTGCGG
CATTTGCCGTTGTCTTTGAGGCTGCGTCATCGTCTGCTGGACCGGGTTGTGCAGGCGGCG
GTGTGTGACGCGGAGGCGGCTTTGAGGCTGTTGGGTGCGTATGGTCTGGTGCGGTGGTAG

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	No significant hit
SignalP	Eukaryota Bacteria, Gram-negative Bacteria, Gram-positive
TMHMM	Transmembrane 1

Rubra_00560 Rubra_00580