Stigm_00120 : CDS information
Location
Organism | Stigmatella aurantiaca |
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Strain | Sga15 |
Entry name | Stigmatellin |
Contig | AJ421825 |
Start / Stop / Direction | 31,943 / 37,738 / + [in whole cluster] 31,943 / 37,738 / + [in contig] |
Location | 31943..37738 [in whole cluster] 31943..37738 [in contig] |
Type | CDS |
Length | 5,796 bp (1,931 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase |
Product (GenBank) | StiD protein |
Gene | |
Gene (GenBank) | stiD |
EC number | |
Keyword | |
Note | |
Note (GenBank) | |
Reference |
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PKS/NRPS Module
4 | methylmalonyl-CoA |
Sequence
>polyketide synthase [StiD protein] MSTTPNMPEQGEDLGRLKRALTALEKMQAKLDAAERGRTEPIAIIGMGCRFPGGANDPES YWQNLIQGTDAISEVPPDRWDVDAFFDSNPDTPGKMYTRWGGFLKNWEVDRFDARFFGIA PREAEAIDPQHRLLLEVSWEAMERAGIAPGGLEGSSTGVFFGLMARDYDILQMKVGDPTR IDAYYGTGNETSFAAGRLSYLLGLRGPSLVVSTACSSSLVALHMACQSLRGKECNLALAG GANLILSPEFTIASCRLRSQSPNGRCKSFDAKADGYVRSEGSGVVVLKRLSDAMADGDRI LAVIRGSAINHDGASSGLTVPSGPAQESLIRAALAAAKVEPHQVSYVEAHGTGTALGDPI EVRALSETLCKGRDRARPLVLGAVKTNVGHLEAAAGMAGLFKAVLALQHGVVPPNLHFSQ PTSHIPWDDLPLLVPTQSVPLASGEGRAIVGVSSFGLSGINAHVVLEAAPEPPHAKAAGA EAGADAAGPVLLPLSARSPDALRVLAEAYVQRVRAPDLRATLQDIAYTAGARRDHFEHRL ALVATSKEALATQLEGFLRGESIQGLSVGEHSSGAPRKATFIFSGQGSQWVGMGQQLIAS EPVFRDAIHQVDTALREHVGWSLLDVLAADKERAGFDRVEVVQPVLFAVQVALAALWRSW GIEPGAVVGHSMGEVAAAHVAGALSLEDAARVIGLRSRLLSRVRGRGGMALVELSLDQVR ELIRPYEGQLSVGASNGPRSTVLSGDPAALEQVLTSLRRQEVFCRPVDVDVASHSPQMEP LLPELERGLAVLQPRAAAVPFYSTVLGDVLDGRRLDASYWARNLRSPVLFFQSLQRLIAA GHELFIEVSPHPVLLPGIEDELRRGSRAGFAVASLRRGEQERSTLLSSLGALYTQGAPVD WRRIYGSAGRCVPLPSYPWQRQRFWVLGGAEATEARAPVAPAAPSRGAAANGQGNEHPVD GTPVRFYDALTKARGSAVDESYLTFGVLNEKQPGFSWLRVAYGLDPSEERMRLLLHSQRA LRNVLLDSVDFSRAKSVWDFGCGYASDIIALGERHSHLKLHGHTLSSEQAELGLRKIEAR GLGGRVQVLRRDSSKDAPLESAYDVILGFEVATHIKEKRSLFQNLSSHLREGGFMLLADF IANSGSGVDVQDIASYNVTPSQWVELLSEHGLRLVECVDVSQEVANFLFDADFDANLTQL ETSVGISAIEKRNYQAMRNFGAALERKILSYVLFIAQKDSHVRSTYLRHINQKWVEAPAP YAARELMLPGRSGDTAEWLYEINWERKARIARTSTQAQGSVLLLADQAGIARALSTKLTE QGVRCILVEPGDAYQREEDHFVVRLGEPGDMAQLVKDVAESGGLRAILHLWSLRAAPLGE TTAATLRKAEKLGCGSTLHLIQALSRTSSRLPPRLWLVTRGAQPVSNAPGTVVVSPAQAP LWGLGRTLALEVPSLWGGLVDVDSAASASDIAEQLAGEVLHSDGEDQVAFREGARFVARL VHPAPFKPTPVTLREDASYLITGGLGDLGLKSAAWMVERGVRWLVLVGRTGLPERSKWPE MDPRSKQGQQIAAVQALEAKGAHVRIAAMDVAEEPRLRMLLSDMRQEGWPAVRGVLHAAG VANPKPLADLDAEGLQAIFRSKAEGSWALHRVLEGTPLDFFVFFSSGSALMSSPLLGGYA AANAFMDALAHTRRAQGLPALSINWGFWSEVGMAAREARGLSQGMESFTPDEGLAVLERL LGQSSPQVGVMRLDVERWIESYPAAGQSPIFSRLRRARVRAASSGPEVPSIREALAALGP GFRRRSMLEQHVREQLAHVLKMPPAQLGMDTPLHDLGTDSLMAIEIRNRLEKSLELVLPA TLVFTYPTVAALVVFLSSTMGLPLEAPPEPPRETAEKKDSASTAAELDALSDDEMAARLA EKLAALNKGRK
>polyketide synthase [StiD protein] ATGAGCACGACGCCCAATATGCCGGAACAGGGAGAAGATCTCGGACGTCTCAAGCGTGCG CTGACCGCGCTTGAGAAAATGCAGGCGAAACTCGATGCCGCCGAGCGCGGCCGGACAGAG CCGATCGCCATTATCGGCATGGGATGCCGTTTTCCCGGCGGCGCCAATGATCCGGAGTCG TACTGGCAGAACCTGATTCAAGGCACAGACGCCATTTCAGAGGTTCCGCCCGATCGCTGG GATGTCGATGCATTCTTTGATTCGAATCCCGACACGCCCGGAAAGATGTACACGCGCTGG GGAGGGTTTCTCAAGAACTGGGAAGTGGATCGGTTCGATGCCCGATTCTTTGGCATTGCT CCCCGTGAGGCGGAAGCCATCGATCCTCAGCACCGCCTGCTTTTGGAGGTGAGCTGGGAA GCCATGGAGCGTGCAGGCATCGCTCCGGGCGGTTTGGAGGGGAGCTCGACCGGCGTCTTC TTCGGGCTCATGGCGAGGGATTACGACATCCTTCAAATGAAGGTGGGAGACCCTACCCGC ATCGATGCGTATTACGGCACCGGGAACGAGACGAGCTTTGCGGCGGGCCGCCTCTCGTAT CTCTTGGGCCTGCGCGGCCCCAGCTTGGTGGTAAGCACGGCTTGCTCCTCCTCGTTGGTG GCTCTGCACATGGCTTGTCAGAGTTTGCGCGGCAAGGAGTGCAATCTGGCGCTGGCCGGT GGGGCCAACCTGATTCTCTCGCCAGAGTTCACGATTGCCTCCTGTCGTCTTCGCTCTCAG TCGCCAAATGGCCGCTGCAAGAGCTTCGACGCGAAGGCCGATGGCTATGTGCGCAGTGAG GGATCCGGCGTCGTCGTGCTCAAGCGGTTGTCGGACGCCATGGCGGATGGAGACAGGATT CTCGCGGTCATCCGAGGCTCCGCCATCAACCATGACGGTGCGAGCAGTGGGTTGACCGTT CCGAGTGGCCCCGCGCAAGAGTCGCTCATTCGCGCGGCCTTGGCTGCCGCCAAGGTTGAG CCCCATCAGGTCTCTTATGTGGAGGCGCATGGTACGGGGACCGCGCTCGGCGATCCGATC GAAGTGCGTGCCTTGAGCGAGACCCTGTGCAAGGGGCGTGATCGCGCACGGCCGTTGGTA CTCGGTGCCGTGAAGACGAACGTCGGGCATCTCGAGGCCGCCGCCGGTATGGCAGGCCTG TTCAAAGCCGTTCTCGCGCTCCAGCACGGGGTGGTGCCGCCCAATCTGCATTTCTCGCAG CCGACCTCCCATATTCCTTGGGACGATCTACCGCTGCTCGTGCCGACGCAGTCGGTTCCG CTTGCCTCGGGAGAGGGGAGGGCCATTGTCGGCGTCAGTTCTTTTGGGCTGAGTGGGATC AACGCGCACGTGGTGCTGGAGGCGGCTCCGGAGCCGCCTCACGCGAAGGCGGCCGGAGCG GAAGCCGGAGCCGACGCTGCGGGACCTGTCCTCCTGCCGTTGTCGGCGCGCAGCCCGGAC GCGTTGCGCGTGTTGGCGGAAGCGTATGTGCAGCGGGTGCGCGCCCCGGACCTGCGCGCG ACGCTTCAGGACATCGCCTATACCGCAGGGGCCCGGCGCGACCACTTCGAACACAGGCTC GCGTTGGTGGCCACGTCGAAGGAAGCGCTTGCCACACAGCTCGAAGGTTTCCTTCGTGGA GAGTCGATCCAGGGCCTGTCCGTGGGGGAGCATTCGTCCGGGGCCCCGCGCAAGGCCACG TTCATCTTTTCCGGCCAGGGGTCGCAGTGGGTTGGAATGGGCCAGCAACTGATCGCCTCC GAGCCTGTATTCCGGGACGCGATCCACCAGGTGGACACGGCCTTGCGCGAGCACGTGGGC TGGTCGCTTCTGGACGTCCTGGCCGCCGACAAAGAGCGTGCAGGTTTCGATCGGGTCGAG GTCGTTCAGCCCGTGCTGTTCGCGGTGCAGGTGGCGCTCGCGGCGCTCTGGCGTTCGTGG GGGATCGAGCCCGGCGCCGTGGTGGGGCATAGCATGGGCGAGGTCGCGGCGGCCCACGTG GCGGGTGCGCTGTCGCTGGAGGATGCCGCGCGGGTCATCGGTTTGAGGAGTCGGCTCCTC AGTCGCGTGAGGGGTCGGGGTGGTATGGCGCTGGTCGAGCTCTCTCTCGACCAGGTGCGT GAGCTTATTCGTCCTTACGAGGGGCAGCTCTCCGTCGGGGCCAGCAATGGTCCGAGGTCC ACCGTTCTCTCGGGGGATCCCGCCGCGCTCGAGCAGGTCCTCACCTCCTTGCGGCGCCAG GAGGTTTTCTGTCGTCCGGTCGATGTCGATGTCGCCTCTCACAGCCCGCAGATGGAGCCC CTGCTTCCGGAACTCGAGCGGGGGTTGGCGGTCCTCCAACCGCGCGCCGCTGCCGTGCCG TTCTATTCGACAGTGCTGGGCGACGTGCTGGATGGCCGACGCCTCGACGCATCTTATTGG GCGCGGAATCTGCGGTCTCCGGTGCTCTTCTTCCAGTCCCTGCAGCGGTTGATCGCGGCG GGTCACGAGCTGTTCATCGAGGTGAGCCCTCATCCGGTGTTGTTGCCGGGGATCGAGGAC GAGCTGCGCCGTGGTAGTCGCGCGGGCTTCGCGGTGGCTTCGCTTCGGAGAGGGGAGCAG GAGAGGAGCACACTGCTCTCTTCTCTCGGAGCCCTGTACACCCAGGGCGCACCGGTGGAC TGGCGTCGGATCTACGGCAGTGCCGGGCGTTGCGTTCCCTTGCCCTCGTACCCCTGGCAG AGACAGCGTTTTTGGGTCTTGGGAGGAGCGGAGGCAACCGAGGCGCGGGCACCTGTTGCC CCAGCGGCTCCGTCGCGAGGGGCGGCAGCCAATGGCCAGGGGAATGAGCACCCGGTGGAT GGAACGCCTGTGCGTTTCTATGACGCGCTGACGAAGGCGCGTGGCTCCGCCGTGGATGAG TCCTATCTGACCTTCGGCGTGCTGAATGAAAAGCAGCCGGGCTTCTCGTGGCTGCGTGTG GCCTACGGCCTCGATCCATCCGAAGAACGCATGCGCCTGTTGCTTCACTCGCAGCGAGCC TTGCGGAATGTGCTGCTCGACAGCGTTGATTTCTCCCGCGCCAAGTCGGTGTGGGATTTT GGGTGTGGCTACGCGTCGGACATCATTGCCCTGGGCGAGCGTCATTCTCACCTCAAGCTG CATGGCCATACGCTCTCGAGTGAGCAGGCGGAGCTCGGACTTCGAAAGATCGAAGCCCGG GGGCTTGGCGGGCGTGTTCAGGTGCTTCGCCGAGACAGCAGCAAAGACGCTCCCCTGGAG AGCGCGTACGACGTGATCCTCGGTTTCGAGGTGGCGACGCACATCAAGGAAAAGCGTTCG CTGTTCCAGAACCTGTCGAGCCACCTCCGCGAGGGTGGCTTCATGCTCCTGGCGGATTTC ATCGCGAACTCGGGCTCAGGCGTGGATGTGCAGGACATCGCCTCGTACAACGTCACGCCC AGCCAGTGGGTGGAACTGCTGAGCGAGCACGGGCTGCGGTTGGTTGAATGCGTGGATGTC AGCCAGGAGGTCGCGAACTTCCTCTTTGATGCGGACTTCGATGCCAACCTGACCCAGCTC GAGACATCGGTGGGGATCAGCGCCATCGAGAAGCGCAACTATCAGGCGATGCGGAACTTC GGGGCGGCGTTGGAGCGGAAGATCCTCTCCTACGTTCTGTTCATTGCCCAGAAGGACTCG CACGTTCGAAGCACCTACTTGCGTCACATCAACCAGAAATGGGTCGAAGCACCTGCGCCG TATGCGGCTCGAGAGTTGATGCTTCCGGGCCGAAGCGGTGACACGGCGGAGTGGCTGTAC GAGATCAACTGGGAACGCAAGGCCCGTATTGCCCGGACCTCGACCCAGGCCCAGGGAAGT GTTCTGCTCCTCGCGGATCAGGCAGGCATCGCACGAGCCCTCTCCACGAAGCTGACGGAG CAGGGGGTGCGGTGCATCCTGGTGGAGCCCGGTGATGCCTATCAGCGGGAGGAAGACCAC TTCGTGGTCCGCCTGGGTGAACCGGGCGACATGGCCCAGTTGGTGAAGGATGTGGCCGAA TCCGGAGGCCTTCGCGCGATCCTCCACCTGTGGAGTCTCCGCGCCGCGCCTCTTGGTGAG ACCACTGCCGCGACGCTGCGCAAGGCGGAGAAACTGGGGTGTGGGAGCACGCTCCATCTC ATTCAGGCGCTGTCCCGCACGAGTTCGCGGCTGCCGCCACGTCTCTGGCTCGTCACGCGG GGGGCTCAGCCGGTGAGCAACGCACCCGGGACCGTTGTCGTGTCCCCCGCTCAAGCGCCG CTGTGGGGTTTGGGCCGCACCCTGGCCTTGGAGGTGCCGTCCCTGTGGGGAGGGCTCGTG GATGTGGATTCCGCTGCATCTGCGTCCGACATTGCCGAGCAGCTCGCAGGAGAGGTGCTG CACTCGGATGGCGAAGATCAGGTCGCCTTCCGTGAGGGGGCGCGGTTCGTCGCGCGCTTG GTGCATCCGGCTCCGTTCAAGCCCACTCCCGTGACGCTGCGTGAGGATGCGAGCTACCTG ATCACCGGTGGTCTCGGTGATCTGGGGTTGAAGAGCGCGGCTTGGATGGTCGAGCGAGGC GTCCGGTGGCTCGTGTTGGTGGGCCGTACTGGGCTCCCCGAGCGTTCCAAGTGGCCGGAG ATGGATCCTCGGAGCAAACAGGGGCAGCAGATTGCCGCCGTGCAGGCGCTAGAGGCGAAG GGTGCACACGTCCGGATCGCTGCCATGGATGTGGCCGAGGAACCTCGGTTGCGCATGCTG CTGTCGGACATGCGTCAGGAGGGGTGGCCCGCCGTTCGAGGGGTGTTGCACGCGGCCGGT GTGGCGAATCCCAAGCCGCTCGCAGACCTCGATGCCGAGGGGCTGCAGGCGATCTTCCGA TCGAAGGCGGAGGGAAGCTGGGCGCTGCATCGCGTTCTCGAGGGGACGCCGCTCGACTTC TTCGTCTTTTTCTCCTCGGGTTCCGCGCTCATGAGTTCGCCCTTGCTGGGTGGCTATGCG GCGGCGAACGCCTTCATGGATGCGCTCGCGCACACCCGGCGTGCGCAGGGTCTACCCGCG CTGAGCATCAACTGGGGGTTCTGGTCCGAGGTGGGAATGGCAGCCCGGGAAGCTCGGGGC CTTTCGCAGGGCATGGAGAGCTTCACCCCCGACGAGGGATTGGCGGTTCTCGAGCGGTTG CTCGGGCAGTCGTCTCCCCAGGTAGGGGTGATGAGGCTCGATGTCGAGCGCTGGATCGAG TCCTACCCGGCTGCTGGCCAGTCACCGATCTTCTCGCGGCTGAGGCGCGCCCGTGTGCGG GCGGCGTCTTCCGGACCTGAGGTTCCCAGCATTCGCGAGGCCCTTGCCGCCCTCGGTCCT GGTTTCCGTCGACGCTCGATGCTCGAGCAGCACGTGCGCGAGCAACTCGCTCACGTGTTG AAGATGCCGCCCGCGCAGCTCGGCATGGACACGCCGCTGCATGACCTGGGCACGGACTCG TTGATGGCCATCGAAATCCGCAACCGTCTCGAGAAGAGTCTCGAGCTCGTGTTGCCCGCG ACCCTGGTCTTCACTTACCCGACGGTCGCCGCACTCGTCGTTTTCCTGTCCAGCACCATG GGGTTGCCGCTCGAAGCGCCGCCTGAGCCGCCACGCGAAACGGCAGAGAAGAAGGACTCT GCCTCAACCGCTGCGGAACTCGACGCGCTCTCCGACGATGAAATGGCCGCTCGCCTGGCT GAAAAGCTGGCAGCTCTCAACAAGGGACGGAAGTGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001227 Acyl transferase domain (Domain)
IPR002198 Short-chain dehydrogenase/reductase SDR (Family)
IPR009081 Acyl carrier protein-like (Domain)
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR014043 Acyl transferase (Domain)
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase (Domain)
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR016040 NAD(P)-binding domain (Domain)
IPR018201 Beta-ketoacyl synthase, active site (Active_site)
IPR020801 Polyketide synthase, acyl transferase domain (Domain)
IPR020803 Polyketide synthase, methyltransferase domain (Domain)
IPR020806 Polyketide synthase, phosphopantetheine-binding domain (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
IPR020842 Polyketide synthase/Fatty acid synthase, KR (Domain)
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SignalP | No significant hit |
TMHMM | No significant hit |