Avil_00050 : CDS information

Location

Organism	Streptomyces viridochromogenes
Strain	Tü57
Entry name	Avilamycin
Contig	AF333038
Start / Stop / Direction	4,852 / 4,307 / - [in whole cluster] 4,852 / 4,307 / - [in contig]
Location	complement(4307..4852) [in whole cluster] complement(4307..4852) [in contig]
Type	CDS
Length	546 bp (181 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	AviX5
Gene
Gene (GenBank)	aviX5
EC number
Keyword
Note	It is supposed that this ORF is not involved in avilamycin biosynthesis.
Note (GenBank)
Reference	ACC Q93KY0 PmId [11410376] Biosynthesis of the orthosomycin antibiotic avilamycin A: deductions from the molecular analysis of the avi biosynthetic gene cluster of Streptomyces viridochromogenes Tu57 and production of new antibiotics. (Chem Biol. , 2001) comment avilamycin A生合成遺伝子クラスターの報告。 AviX5: - [Proposed function:Unknown] avi gene clusterの境界決定のための実験をしていないが、AviRb-AviZ2が生合成遺伝子だと記述している。

Sequence

>hypothetical protein [AviX5]
MTSHGINAPCAQHGRRYVRPPAEDEPLDPAWRPVDLTRAPFEDRAAEDRAPWPDDRPALC
WWLPTSGVMATRRTTTPHIETLVQQLDGDDDASYAARAQLVDIGRDAILTIIGGLPTLGS
FGRLTAIEVFEEVADPRCCPALIALLDADDPSVREWARGPDRTRRPPTSPRSSTTWPTTP
K

>hypothetical protein [AviX5]
GTGACGTCGCACGGGATCAATGCGCCCTGCGCCCAGCACGGTCGGCGGTACGTCCGCCCG
CCGGCCGAGGACGAGCCGCTCGACCCCGCCTGGCGCCCCGTCGACCTGACACGCGCCCCC
TTCGAAGACCGGGCAGCCGAGGACCGCGCCCCGTGGCCCGACGACCGCCCGGCGCTCTGC
TGGTGGCTCCCCACCTCTGGCGTCATGGCCACCCGGCGCACCACGACCCCCCACATCGAG
ACCCTCGTCCAGCAGCTCGACGGCGACGACGACGCCTCATACGCCGCCCGCGCGCAGCTG
GTCGACATCGGTCGTGACGCAATCCTTACGATCATCGGCGGGCTGCCTACCCTGGGCAGC
TTCGGCCGGCTGACCGCCATCGAGGTCTTCGAAGAGGTAGCAGACCCACGCTGCTGCCCC
GCCCTGATCGCCCTGCTGGACGCTGACGACCCCAGCGTCAGGGAATGGGCGCGGGGCCCT
GACCGAACTCGGCGCCCGCCCACTTCACCGAGATCATCAACGACCTGGCCGACCACGCCC
AAGTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR011989 Armadillo-like helical (Domain) G3DSA:1.25.10.10 ARM-like
SignalP	No significant hit
TMHMM	No significant hit

Avil_00040 Avil_00060