Griseo_00180
Griseo_00190 : CDS information
Location
| Organism | Streptomyces sp. |
|---|---|
| Strain | JP95 |
| Entry name | Griseorhodin A |
| Contig | AF509565 |
| Start / Stop / Direction | 19,815 / 21,404 / + [in whole cluster] 19,815 / 21,404 / + [in contig] |
| Location | 19815..21404 [in whole cluster] 19815..21404 [in contig] |
| Type | CDS |
| Length | 1,590 bp (529 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | putative efflux protein GrhK |
| Gene | |
| Gene (GenBank) | grhK |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
|
| Related Reference |
|
Sequence
>putative drug resistance transporter [putative efflux protein GrhK] MSAPTPPAPGGPHPSGTRTTPVMVACMLSAFVAILDLQIVSTALPRIAGDLGGIDLFAWV TIAYVIASSVTTPIYGKLGDLFGRKVTYLSAMGLFLLGSALAGAAGSMEQLIVFRIVQGL GAGGLFVSVLAIIGELFTPREGAKYYGMFGMVFAGASLAGPAVGGLLTDALSWHWVFLVN LPVGAVIVALLVKYLHLPRKAAAGAKLDYAGIVTLSAAIIALTLLTSWGGVEYAWTSPQI IGLGLGTLVFLGLFVKAESTASEPIVPLRLFRDSTFTISLLGTTVCGIVFVGAVQFLALY VQVATGASPTASGFILLPMMMGLVLSSVGSSRIIMKTGTYKIFPILSMALGIVGALLLST MDSDTPRVLTILYMVVFGFASGLSAQVFTQAAQNTAPPQDMGAVSGTVTFGRSFGTSIGI SLFAAVFYGRLTDELAARVPDGALDGIDRNSLSSDTVLATLADPVRGAVEDAYAASLTPV FTTAVPILAVGLVLTLLMKNLTLRSRHHGADEPAESPAPAAADGTPETA
>putative drug resistance transporter [putative efflux protein GrhK] ATGTCCGCTCCCACTCCCCCGGCCCCCGGGGGCCCGCACCCCTCCGGCACCAGGACCACC CCGGTCATGGTCGCCTGCATGCTCTCCGCGTTCGTGGCCATCCTCGACCTGCAGATCGTC TCCACCGCCCTGCCCCGCATCGCGGGCGACCTCGGCGGCATCGACCTCTTCGCCTGGGTG ACCATCGCCTACGTCATCGCCTCCAGCGTCACCACGCCGATCTACGGCAAGCTCGGCGAC CTCTTCGGCCGCAAGGTCACCTACCTCTCGGCCATGGGTCTGTTCCTGCTCGGCTCCGCG CTCGCGGGCGCCGCCGGCAGCATGGAGCAGCTCATCGTCTTCCGCATCGTGCAGGGGCTG GGCGCCGGAGGGCTGTTCGTCTCCGTCCTCGCGATCATCGGCGAGCTGTTCACCCCGCGC GAGGGCGCCAAGTACTACGGCATGTTCGGCATGGTCTTCGCCGGCGCCTCCCTGGCCGGC CCGGCCGTGGGCGGTCTGCTCACCGACGCGCTCAGCTGGCACTGGGTCTTCCTGGTCAAC CTCCCCGTCGGCGCCGTGATCGTCGCCCTGCTGGTCAAGTACCTGCACCTGCCCCGGAAG GCCGCCGCGGGCGCCAAGCTCGACTACGCGGGCATCGTCACGCTCTCCGCGGCCATCATC GCCCTCACCCTGCTCACGTCCTGGGGCGGCGTCGAGTACGCCTGGACCTCCCCGCAGATC ATCGGGCTCGGCCTCGGCACCCTGGTCTTCCTCGGACTGTTCGTGAAGGCCGAGTCGACC GCCTCGGAGCCGATCGTCCCGCTGCGCCTCTTCCGGGACTCCACCTTCACCATCTCGCTG CTCGGCACCACCGTCTGCGGCATCGTCTTCGTCGGCGCGGTCCAGTTCCTCGCCCTGTAC GTCCAGGTCGCCACCGGCGCCAGCCCCACCGCCTCCGGCTTCATCCTGCTGCCGATGATG ATGGGCCTCGTGCTCTCCTCCGTGGGGTCGAGCCGGATCATCATGAAGACCGGCACGTAC AAGATCTTCCCGATCCTGAGCATGGCGCTCGGCATCGTCGGAGCCCTCCTGCTGTCCACC ATGGACTCGGACACCCCGCGCGTGCTCACCATCCTCTACATGGTGGTCTTCGGCTTCGCC TCGGGCCTCTCGGCCCAGGTGTTCACGCAGGCGGCCCAGAACACCGCGCCCCCGCAGGAC ATGGGCGCCGTCTCCGGCACCGTGACCTTCGGCCGCTCCTTCGGCACCTCGATCGGCATC TCGCTCTTCGCGGCCGTCTTCTACGGACGGCTCACCGACGAACTCGCCGCCCGGGTGCCG GACGGCGCCCTCGACGGCATCGACCGCAACTCGCTCTCCTCGGACACCGTCCTCGCCACC CTCGCGGACCCGGTGCGCGGCGCCGTCGAGGACGCGTACGCGGCCTCGCTCACCCCGGTG TTCACCACCGCCGTGCCGATCCTCGCGGTGGGCCTGGTCCTCACCCTGCTCATGAAGAAC CTCACGCTCCGCTCCCGCCACCACGGCGCCGACGAGCCGGCCGAGAGCCCGGCGCCGGCC GCCGCCGACGGCACCCCCGAGACGGCCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR001411 Tetracycline resistance protein TetB/drug resistance transporter (Family)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP |  ![[1-42] 0.812 Signal](../../img/R.gif "[1-42] 0.812 Signal"){kind=small} |
| TMHMM | ![[20-42] Transmembrane (i-o)](../../img/C.gif "[20-42] Transmembrane (i-o)"){kind=small} ![[57-79] Transmembrane (o-i)](../../img/G.gif "[57-79] Transmembrane (o-i)"){kind=small} |
![[25-49] 6.40000038788486e-11 PR01036](../../img/F.gif "[25-49] 6.40000038788486e-11 PR01036"){kind=small}
![[27-419] 4.10000000000004e-44 PF07690](../../img/H.gif "[27-419] 4.10000000000004e-44 PF07690"){kind=small}
![[1-515] 3.49999466863949e-68 SSF103473](../../img/B.gif "[1-515] 3.49999466863949e-68 SSF103473"){kind=small}
![[22-503] PS50850](../../img/M.gif "[22-503] PS50850"){kind=small}
