Indano_00080 : CDS information

Location

Organism	Streptomyces antibioticus
Strain	NRRL 8167
Entry name	Indanomycin
Contig	FJ545274
Start / Stop / Direction	9,033 / 8,437 / - [in whole cluster] 9,033 / 8,437 / - [in contig]
Location	complement(8437..9033) [in whole cluster] complement(8437..9033) [in contig]
Type	CDS
Length	597 bp (198 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	MarR regulatory protein
Gene
Gene (GenBank)	idmD
EC number
Keyword
Note
Note (GenBank)
Reference	ACC C5HV06 PmId [19301315] Analysis of the indanomycin biosynthetic gene cluster from Streptomyces antibioticus NRRL 8167. (Chembiochem. , 2009) comment indanomycin biosynthetic gene clusterに関する文献。 idmD(198a.a): MarR regulatory protein idmD自体の機能実験は無いが、相同性よりMarR transcriptional regulatorであると予測している。

Sequence

>hypothetical protein [MarR regulatory protein]
MSSDGGDQADQADQDTDAARVRKWVEQVGTWFMQQSGWPPIMGRTLAWLMVSDPPEQNPA
QIAAAVQASRASLTSTLRLLTEARMIQAVTRSGDRSTYYRVAPDAWSAMLRRRLESIASF
SDITDEGLGLFPQGAHRAERLREAHRVFEWLNVEAEPLLKRWDDVRDTFTPDDTATGAGP
APATPPADHPPRKEGHRD

>hypothetical protein [MarR regulatory protein]
ATGTCGTCCGACGGCGGCGACCAGGCCGATCAGGCCGATCAGGACACCGACGCCGCGCGG
GTCCGGAAATGGGTCGAGCAGGTCGGCACCTGGTTCATGCAGCAGTCCGGCTGGCCTCCG
ATCATGGGACGGACGCTGGCCTGGCTGATGGTCAGCGACCCGCCGGAGCAGAATCCCGCC
CAGATCGCCGCCGCCGTACAGGCGAGCCGGGCCTCGCTCACCAGCACACTGCGGCTGCTG
ACCGAGGCCCGGATGATCCAGGCCGTCACCCGCAGCGGGGACCGTTCCACGTACTACCGC
GTCGCGCCGGACGCCTGGTCCGCCATGCTCCGCCGACGGCTGGAGAGCATCGCCTCCTTC
TCCGACATCACGGACGAGGGGCTGGGCCTGTTCCCGCAGGGCGCGCACCGGGCGGAACGC
CTGCGCGAAGCGCACCGGGTCTTCGAGTGGCTCAACGTCGAGGCGGAACCGCTGCTCAAG
CGCTGGGACGACGTACGCGACACCTTCACCCCCGATGACACGGCGACCGGCGCCGGTCCT
GCGCCGGCGACGCCGCCCGCAGACCACCCCCCACGGAAAGAAGGACACCGTGACTAA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain) G3DSA:1.10.10.10 Wing_hlx_DNA_bd
SignalP	No significant hit
TMHMM	No significant hit

Indano_00070 Indano_00090