Indano_00060
Indano_00070 : CDS information
Location
| Organism | Streptomyces antibioticus |
|---|---|
| Strain | NRRL 8167 |
| Entry name | Indanomycin |
| Contig | FJ545274 |
| Start / Stop / Direction | 8,444 / 6,894 / - [in whole cluster] 8,444 / 6,894 / - [in contig] |
| Location | complement(6894..8444) [in whole cluster] complement(6894..8444) [in contig] |
| Type | CDS |
| Length | 1,551 bp (516 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | efflux transporter |
| Gene | |
| Gene (GenBank) | idmC |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [efflux transporter] MTNEDSRRWWALAAIGLSLLTVSVDATILNVALPTVSTELGASTSDLQWFVDAFTLAMAA LLLPAGLLGDRLGRKTMLMASLFLFGLASLWCAYSGSAGMLIAARTVLGISAAFLVPLCT SVLLDIFEGEHERAKAIGVIAVTQSLGLPLGPIIGGALLNHFWWGSVFLINVPLVAVGLL AVARLVPSSRGSQHGAIDLLGVLLSSVGLVALVYGAIEAGERGWSDPQSLLPLIGGLALL VVFVLWEVRVAVSRDPLLDLSLFRSAGFVWGSILGTVVSFAMFGLIFALPQYFQAVDGTD ALGTGLRLLPLIGGVLVSAAVIRSSPEAAPRAVPTAGFVLVAIGLFMGTRTSLSTDYGFV ALWLVITGLGLGLAMTRTMAAAVNSLSKERSGVGSAVVSALRQVGGAVGVAVLGTIANAS YRSHLTLPGLPDDAKEAARRSVGAGVAVGEQLGSPAVVRSVQDAFVHAMQSLLAVCGGIA VVAAVLALLFMPKRAAGTEPHGEGDEQGSSALRKAA
>putative drug resistance transporter [efflux transporter] GTGACTAACGAGGACTCCCGCCGCTGGTGGGCCCTGGCGGCGATCGGCTTAAGTCTCCTG ACCGTCAGTGTGGATGCCACGATCCTCAACGTCGCACTGCCGACGGTCAGTACGGAACTC GGCGCGTCGACCAGTGACCTGCAGTGGTTCGTCGACGCGTTCACCCTGGCCATGGCCGCC CTGCTGCTTCCGGCAGGTCTGCTCGGAGACCGGCTGGGCCGCAAGACCATGCTGATGGCC TCGCTGTTCCTCTTCGGCCTTGCCTCGCTGTGGTGCGCCTACTCCGGGTCCGCGGGCATG CTCATCGCGGCCCGGACGGTGCTCGGCATCAGCGCGGCGTTCCTCGTGCCGCTGTGCACC TCCGTGCTCCTCGACATCTTCGAGGGCGAGCACGAACGGGCGAAGGCCATCGGTGTCATC GCCGTAACCCAGTCACTGGGCCTCCCGCTCGGTCCGATCATCGGCGGCGCCCTGCTCAAC CACTTCTGGTGGGGTTCGGTCTTCCTCATCAACGTGCCGCTCGTCGCCGTGGGCCTGCTC GCCGTGGCCCGCCTGGTGCCGTCCTCACGGGGTTCACAGCACGGTGCCATCGACCTCCTC GGCGTACTGCTCTCCAGTGTCGGCCTGGTCGCCCTCGTCTACGGTGCGATCGAGGCCGGC GAGAGGGGCTGGAGCGACCCTCAGTCCCTGCTGCCGCTGATCGGTGGCCTGGCACTGCTG GTCGTCTTCGTCCTGTGGGAGGTCCGGGTCGCGGTCTCCCGGGATCCCCTGCTGGACCTG TCCCTGTTCCGCAGCGCCGGATTCGTGTGGGGCTCGATCCTCGGCACCGTCGTCAGCTTC GCGATGTTCGGGCTCATCTTCGCCCTGCCCCAGTACTTCCAGGCGGTCGACGGGACGGAC GCGCTGGGCACGGGCCTGCGGCTGCTGCCGCTGATCGGTGGGGTACTGGTCAGCGCCGCC GTCATCCGCAGCTCCCCCGAGGCCGCCCCCCGCGCGGTGCCCACGGCCGGTTTCGTCCTC GTCGCGATCGGCCTGTTCATGGGCACCAGGACCTCGCTCTCCACCGACTACGGGTTCGTG GCCCTCTGGCTCGTGATCACGGGGCTGGGTCTCGGTCTCGCCATGACCCGGACGATGGCG GCGGCGGTCAACTCCCTGTCCAAGGAACGCTCCGGCGTCGGCTCCGCGGTCGTCTCGGCA CTGCGTCAGGTGGGCGGCGCGGTGGGTGTGGCGGTGCTCGGCACGATCGCCAACGCGAGC TACCGGTCGCATCTGACGCTCCCCGGCCTGCCCGATGACGCGAAGGAGGCCGCCCGGCGC AGCGTCGGAGCCGGGGTGGCGGTGGGCGAGCAGTTGGGAAGCCCCGCCGTCGTGCGCTCC GTGCAGGACGCCTTCGTCCACGCGATGCAGTCCCTTCTCGCGGTGTGCGGCGGTATCGCC GTGGTCGCCGCGGTGCTGGCCCTGCTGTTCATGCCGAAGCGGGCGGCCGGTACAGAGCCG CACGGCGAGGGCGACGAGCAGGGGTCCTCGGCGCTCCGGAAAGCCGCCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR004638 Drug resistance transporter EmrB/QacA subfamily (Family)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP |  ![[1-26] 0.926 Signal](../../img/R.gif "[1-26] 0.926 Signal"){kind=small} |
| TMHMM | ![[12-34] Transmembrane (i-o)](../../img/C.gif "[12-34] Transmembrane (i-o)"){kind=small} ![[49-68] Transmembrane (o-i)](../../img/G.gif "[49-68] Transmembrane (o-i)"){kind=small} |
![[17-487] 1.69999999999998e-79 TIGR00711](../../img/T.gif "[17-487] 1.69999999999998e-79 TIGR00711"){kind=small}
![[17-409] 1.6e-45 PF07690](../../img/H.gif "[17-409] 1.6e-45 PF07690"){kind=small}
![[1-507] 7.19996395544006e-69 SSF103473](../../img/B.gif "[1-507] 7.19996395544006e-69 SSF103473"){kind=small}
![[11-495] PS50850](../../img/M.gif "[11-495] PS50850"){kind=small}
