Kirro_00390 Kirro_00390   Kirro_00410 Kirro_00410

Kirro_00400 : CDS information

close this sectionLocation

Organism
StrainTü365
Entry nameKirromycin
Contig
Start / Stop / Direction98,383 / 98,024 / - [in whole cluster]
98,383 / 98,024 / - [in contig]
Locationcomplement(98024..98383) [in whole cluster]
complement(98024..98383) [in contig]
TypeCDS
Length360 bp (119 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category4.1 transcriptional regulator
Productputative TetR family transcriptional regulator(fragment)
Product (GenBank)putative TetR family transcriptional regulator
Gene
Gene (GenBank)kirRII
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[18291322] Molecular analysis of the kirromycin biosynthetic gene cluster revealed beta-alanine as precursor of the pyridone moiety. (Chem Biol. , 2008)
comment
kirromycin生合成gene clusterの報告。

相同性から機能付けされているのみ。
Family/Domain
FD
IPR001647
comment
[IPR001647] Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal (Domain)

close this sectionSequence

selected fasta
>putative TetR family transcriptional regulator(fragment) [putative TetR family transcriptional regulator]
MRYCICVLGRRPIIGKRLTRQESREITRQDLLQAAADLFAECGVNGTSVEQIVERAGYSR
GAFYGNFDGKQQLILALLEQRTERELAEVQALSADAGSFEETIEHLRNWHRGRDKNFAS
selected fasta
>putative TetR family transcriptional regulator(fragment) [putative TetR family transcriptional regulator]
ATGCGGTACTGTATCTGTGTTCTCGGAAGGAGGCCCATCATCGGCAAACGACTCACCCGG
CAGGAGAGCCGGGAAATCACGCGCCAGGACCTGCTGCAGGCAGCTGCCGACCTGTTCGCC
GAATGCGGTGTCAACGGCACCTCGGTCGAACAGATCGTGGAACGCGCCGGGTACTCCCGG
GGCGCCTTCTACGGCAACTTCGACGGCAAGCAACAGCTGATCCTGGCTCTCCTGGAGCAG
CGCACCGAGCGTGAACTGGCCGAGGTGCAGGCACTCAGCGCCGACGCCGGCTCGTTCGAG
GAGACGATCGAGCACCTGCGCAACTGGCATCGCGGGCGGGACAAGAACTTCGCGAGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR001647 DNA-binding HTH domain, TetR-type (Domain)
[31-44] 1.9000006847787e-08 PR00455 [52-75] 1.9000006847787e-08 PR00455
PR00455   HTHTETR
[31-77] 6.1e-16 PF00440
PF00440   TetR_N
[25-85] PS50977
PS50977   HTH_TETR_2
IPR009057 Homeodomain-like (Domain)
[15-103] 3.30000526807186e-20 SSF46689
SSF46689   Homeodomain_like
IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal (Domain)
[19-105] 1.1e-24 G3DSA:1.10.357.10
G3DSA:1.10.357.10   TetR_C
SignalP No significant hit
TMHMM No significant hit
Kirro_00390 Kirro_00390   Kirro_00410 Kirro_00410
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