Lasal_00060
Lasal_00070 : CDS information
Location
| Organism | Streptomyces lasaliensis |
|---|---|
| Strain | ATCC 35851 |
| Entry name | Lasalocid |
| Contig | AB449340 |
| Start / Stop / Direction | 7,438 / 5,870 / - [in whole cluster] 7,438 / 5,870 / - [in contig] |
| Location | complement(5870..7438) [in whole cluster] complement(5870..7438) [in contig] |
| Type | CDS |
| Length | 1,569 bp (522 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | putative resistance protein |
| Gene | |
| Gene (GenBank) | lsd5 |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [putative resistance protein] MEAVMSVSDARRWWAVGALALSALVVGLDTTVLNVALPTLATDLEASTSELQWFANAYNL VFAAVLLPAGLSGDRYGRKKLLVVALVLFGAASVGCAYSGSTDALIWWRALLGLGAGFIF PLSLSVLPVMFSDEERPKAIGMVVTASALGLPLGPIVGGWLLDNFWWGSVFLINVPMVAL AIVAVLLLLPDSRSPEPPGLDLVGVLLSSAGLAGITYGAIKAGEKSWGDGTALTMLIGGV VLMLLFVVWQRHLAARPDGKPLVDLSLFRSPAFTWGAVMATVVSFALFGLLFTVPQYYQA VLGADALGTGLRLLPIIGGIIVGARVGGKVTAKAGPKRLVSVGFLLMAVGLFMGAVTDTD TSYGYAATWIAVVGLGTGLALPLAVDSALGALSTERSGVGSAVIQTVRQVGGTIGVALLG TILTSSYHSHLEVGSIPDRAADAAGESVSAGVLVAQKLHSPALLSSVQESFVHGMNVMLV VCGAIAVVGTVLAALFMPQQAKREQPGTDPVAPADAQPRGAL
>putative drug resistance transporter [putative resistance protein] ATGGAGGCCGTCATGAGCGTCTCGGATGCCCGACGATGGTGGGCGGTGGGCGCCCTGGCG TTGAGTGCGCTGGTGGTGGGCCTGGACACGACGGTCCTGAACGTCGCCCTGCCCACGCTC GCCACCGACCTGGAGGCCTCGACCAGCGAACTGCAGTGGTTCGCCAACGCCTACAACCTG GTCTTCGCCGCGGTGCTGCTGCCGGCGGGGCTCTCCGGTGACCGCTATGGCCGCAAGAAG CTGCTCGTGGTGGCACTGGTCCTGTTCGGCGCCGCCTCCGTCGGCTGCGCCTACTCCGGC TCCACGGACGCCCTGATCTGGTGGCGCGCCCTGCTCGGCCTGGGCGCCGGGTTCATCTTC CCGCTGTCCCTGTCGGTGCTCCCCGTGATGTTCTCCGACGAGGAGCGACCGAAGGCGATC GGCATGGTCGTGACCGCCAGCGCGCTCGGGCTCCCGCTCGGCCCGATCGTCGGCGGCTGG CTGCTGGACAACTTCTGGTGGGGCTCGGTCTTCCTCATCAACGTCCCCATGGTCGCCCTC GCGATCGTCGCCGTCCTGCTGCTGCTGCCCGACTCCCGCAGCCCGGAACCTCCGGGGCTC GACCTGGTGGGCGTCCTGCTCTCCAGCGCCGGCCTCGCCGGCATCACTTACGGGGCCATC AAGGCCGGCGAGAAGAGCTGGGGCGACGGCACGGCCCTCACGATGCTGATCGGCGGCGTG GTCCTGATGCTGCTGTTCGTCGTGTGGCAGCGCCATCTCGCGGCGCGCCCCGACGGCAAG CCCCTGGTCGACCTCTCGCTCTTCAGGTCACCCGCGTTCACCTGGGGCGCGGTGATGGCC ACAGTCGTGTCGTTCGCCCTGTTCGGACTGCTGTTCACCGTGCCGCAGTACTACCAGGCC GTCCTCGGCGCCGACGCCCTCGGCACGGGACTGCGGCTGCTGCCGATCATCGGCGGCATC ATCGTCGGCGCCCGGGTGGGCGGCAAGGTCACCGCCAAGGCGGGGCCCAAGCGGCTGGTC TCCGTGGGCTTCCTGCTGATGGCCGTCGGACTGTTCATGGGAGCGGTGACCGACACCGAC ACCTCCTACGGCTACGCGGCCACCTGGATCGCCGTCGTCGGCCTCGGCACGGGCCTCGCG CTCCCCCTGGCCGTCGACTCGGCGCTCGGCGCGCTGTCGACCGAACGCAGCGGCGTCGGC TCCGCCGTGATCCAGACGGTCCGCCAGGTCGGCGGCACCATCGGCGTGGCGCTCCTCGGC ACCATCCTGACCTCCTCCTACCACAGCCACCTGGAGGTGGGTTCGATCCCCGACCGGGCC GCGGACGCGGCAGGGGAGAGCGTTTCCGCCGGCGTCCTCGTCGCGCAGAAGCTGCACTCG CCCGCCCTGCTCTCCAGCGTGCAGGAGTCGTTCGTCCACGGCATGAACGTGATGCTGGTC GTCTGCGGCGCCATCGCCGTCGTCGGCACCGTGCTCGCGGCGCTGTTCATGCCGCAGCAG GCGAAGCGGGAGCAGCCGGGCACCGACCCCGTCGCCCCGGCCGACGCCCAGCCGCGGGGC GCGCTCTAG
Feature
| BLASTP Database:UniProtKB:2011_09 |
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|---|---|
| InterPro Database:interpro:38.0 |
IPR004638 Drug resistance transporter EmrB/QacA subfamily (Family)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
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| SignalP |  ![[1-27] 0.926 Signal](../../img/R.gif "[1-27] 0.926 Signal"){kind=small} |
| TMHMM | ![[13-35] Transmembrane (i-o)](../../img/C.gif "[13-35] Transmembrane (i-o)"){kind=small} ![[50-72] Transmembrane (o-i)](../../img/G.gif "[50-72] Transmembrane (o-i)"){kind=small} |
![[17-494] 3.30000000000002e-80 TIGR00711](../../img/T.gif "[17-494] 3.30000000000002e-80 TIGR00711"){kind=small}
![[19-415] 7.20000000000003e-54 PF07690](../../img/H.gif "[19-415] 7.20000000000003e-54 PF07690"){kind=small}
![[1-506] 1.79999754022378e-80 SSF103473](../../img/B.gif "[1-506] 1.79999754022378e-80 SSF103473"){kind=small}
![[15-501] PS50850](../../img/M.gif "[15-501] PS50850"){kind=small}
