Ncarz_00130 Ncarz_00130   Ncarz_00150 Ncarz_00150

Ncarz_00140 : CDS information

close this sectionLocation

Organism
StrainATCC 15944
Entry nameNeocarzinostatin
Contig
Start / Stop / Direction30,490 / 31,383 / + [in whole cluster]
30,490 / 31,383 / + [in contig]
Location30490..31383 [in whole cluster]
30490..31383 [in contig]
TypeCDS
Length894 bp (297 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[15797213] The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases. (Chem Biol. , 2005)
comment
Neocarzinostatin生合成遺伝子クラスターの報告。

orf24: glucosidase

Table.1のproposed functionでは、protein homologにhypothetical protein STM1317 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]を表記している。

機能推測ができなかったとの記述あり。

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MTERLLVVNADDYGLSEGISRGILRAHDAGVVTSVSVLAVGPAVARSAAWLRDRPALGVG
AHLAAVGEDPPLLSAREIPTLVDRRGLFRRSWRAFMTAAVTGRVDMADVHREFQAQLDRL
VDDLGLTLSHIDTHQHLHLYPPVAQIVTRLAADRGIGAVRVPTSAAPGPRGLVIRHWSRA
LASRLSVAQLAFPQAYGGLDEAGAMTLPRFEALVDRLARGQADAIEVNCHPGEPTPGDRA
RYAWGYRWEEELAGLTSPFLRATLQRLELRLGRFSDLPAPGMRAPRAEGGEPPRRPG
selected fasta
>hypothetical protein [unknown]
GTGACGGAACGGCTCCTCGTCGTCAATGCCGACGACTACGGTCTCAGCGAGGGAATCTCC
CGGGGCATCTTGAGGGCGCACGACGCGGGAGTCGTCACGAGCGTCTCGGTCCTCGCCGTC
GGTCCGGCGGTGGCGCGCTCGGCCGCCTGGCTACGGGACCGGCCGGCCCTCGGGGTCGGC
GCTCACCTGGCGGCGGTCGGGGAGGATCCGCCGCTGCTGAGCGCACGCGAGATCCCGACC
CTGGTCGACAGGCGAGGCCTCTTCCGCAGAAGCTGGCGGGCTTTCATGACCGCGGCGGTC
ACGGGGCGCGTCGACATGGCGGACGTGCACCGGGAGTTCCAGGCGCAACTCGACCGCCTC
GTCGACGACCTCGGCCTGACGCTGAGCCACATCGACACCCACCAGCATCTTCACCTCTAC
CCGCCCGTCGCGCAGATCGTGACGCGGTTGGCCGCGGATCGGGGGATCGGTGCCGTGCGA
GTGCCGACGAGCGCCGCCCCGGGGCCGCGAGGACTCGTGATCCGTCACTGGAGTCGGGCT
CTGGCATCCCGGCTGAGCGTCGCGCAGCTGGCGTTCCCGCAGGCGTACGGGGGACTCGAC
GAGGCGGGTGCCATGACCCTCCCGCGCTTCGAAGCCCTTGTCGACCGCCTGGCCCGCGGC
CAGGCCGACGCCATCGAAGTCAACTGCCATCCCGGTGAACCCACACCGGGCGACCGGGCG
CGGTACGCGTGGGGATACCGGTGGGAGGAGGAACTCGCGGGCCTGACCTCTCCGTTCCTG
CGTGCGACGCTGCAGCGGCTGGAGCTGCGCCTCGGCAGATTCAGTGACCTTCCCGCCCCC
GGCATGCGTGCGCCGCGGGCGGAGGGGGGTGAACCGCCCCGCCGCCCCGGGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR002509 Polysaccharide deacetylase (Domain)
[3-277] 4.09999999999995e-73 G3DSA:3.20.20.370
G3DSA:3.20.20.370   Polysac_deacetylase
IPR006879 Uncharacterised protein family UPF0249/HpnK (Family)
[5-266] 5.99999999999995e-68 PF04794
PF04794   YdjC
SignalP No significant hit
TMHMM No significant hit
Ncarz_00130 Ncarz_00130   Ncarz_00150 Ncarz_00150
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