Ncarz_00190
Ncarz_00200 : CDS information
Location
| Organism | Streptomyces carzinostaticus |
|---|---|
| Strain | ATCC 15944 |
| Entry name | Neocarzinostatin |
| Contig | AY117439 |
| Start / Stop / Direction | 38,906 / 37,422 / - [in whole cluster] 38,906 / 37,422 / - [in contig] |
| Location | complement(37422..38906) [in whole cluster] complement(37422..38906) [in contig] |
| Type | CDS |
| Length | 1,485 bp (494 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | transmembrane transporter |
| Gene | ncsA1 |
| Gene (GenBank) | |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [transmembrane transporter] MNPDVAADGAEDPQAKADPRRWWVLALLSGLQFMILLDMTVVNVALPLVQEGLGFSEAGL TWVVNGYVLAAGGLLILGGRLADVFGRRRLLLIGVGIFAASSAVCGAAVVPGMMVVGRFA QGTAEAIAAPASLGLIALLFTDPKERNKALGIWGGLVALGGTLGYIVSGVLTDLTSWRWI FYINLPVALAVLLVIPRMVTESRMERERDQGLDIAGAVTSTAGLVAIVYGLLQAAEHPWE SASVVLPLAGGIALLLAMLIIERRVENPLIPLDFFANRTRSVINLTSLFFMAAFISYTFI LTLFEQHVLKYSPLETGLAYLPLGFGIGIGIGVGTALTPRIGVRAVVAMGFIGAGIGLLL TSTVDVDTRYAGGILPGMVVFGVFAGATMPAATSAALHQVTDQNSSLASGVQNTMQQIGG ALGLAVLVPLAIRYTTSEIQAGVPVETAVTSGYVLAFRVGAALMIIGGVLIMALFERVDP ALRDPTSEIVAQTR
>putative drug resistance transporter [transmembrane transporter] GTGAACCCCGATGTGGCCGCGGACGGCGCCGAGGACCCTCAGGCGAAGGCGGATCCTCGG CGCTGGTGGGTACTGGCCCTGCTCTCCGGCCTGCAGTTCATGATCCTTCTGGACATGACC GTCGTGAACGTGGCGCTGCCGCTTGTCCAGGAGGGTCTCGGCTTCTCGGAGGCAGGCCTG ACCTGGGTGGTCAACGGGTATGTGCTGGCGGCCGGAGGCCTGCTGATCCTCGGTGGCCGT CTGGCCGACGTCTTCGGCCGGCGGCGCCTGCTGCTGATCGGCGTCGGCATCTTTGCGGCG TCTTCGGCCGTGTGCGGCGCGGCCGTCGTTCCCGGGATGATGGTCGTGGGCCGGTTCGCC CAGGGAACCGCCGAGGCCATCGCAGCCCCCGCGTCACTCGGATTGATCGCGCTGCTCTTC ACCGACCCGAAGGAACGCAACAAGGCCCTCGGTATCTGGGGCGGACTCGTGGCGCTGGGT GGGACCCTGGGATACATCGTCTCCGGAGTGCTGACTGACCTGACGTCCTGGCGCTGGATC TTCTACATCAACCTGCCGGTGGCCCTGGCCGTGCTGCTGGTCATCCCGCGGATGGTCACC GAGAGCCGGATGGAGCGCGAGAGGGACCAGGGGCTCGACATCGCCGGCGCGGTCACCTCG ACCGCGGGGCTCGTGGCCATCGTCTACGGACTGCTGCAGGCCGCCGAGCACCCCTGGGAG TCGGCCTCCGTGGTGCTACCGCTCGCCGGTGGCATCGCCCTGCTGCTCGCCATGCTCATC ATCGAGCGCCGCGTCGAGAACCCGCTCATCCCGCTGGACTTCTTCGCCAACCGGACCAGG TCGGTCATCAACCTGACCTCCCTGTTCTTCATGGCGGCGTTCATCTCGTACACCTTCATC CTGACGTTGTTCGAGCAGCACGTGCTGAAGTACTCGCCGCTCGAGACCGGCCTGGCGTAC CTCCCCCTCGGATTCGGCATCGGTATCGGCATCGGGGTGGGGACCGCGCTGACCCCGCGC ATCGGAGTGCGGGCGGTCGTGGCGATGGGCTTCATCGGCGCCGGGATCGGACTGCTGCTG ACGAGCACGGTCGATGTCGACACTCGCTATGCCGGAGGGATCCTGCCGGGAATGGTCGTG TTCGGCGTATTCGCGGGCGCCACCATGCCGGCCGCGACGAGCGCCGCCCTCCACCAGGTC ACCGACCAGAACTCAAGCCTCGCCTCGGGCGTCCAGAACACCATGCAGCAGATTGGAGGA GCCCTGGGGCTCGCCGTTCTGGTACCTCTGGCCATCCGGTACACCACCAGTGAGATCCAG GCCGGTGTCCCCGTCGAGACCGCAGTGACGTCGGGGTATGTCCTGGCCTTCCGGGTGGGA GCAGCGCTGATGATCATCGGCGGTGTCCTGATCATGGCGCTCTTCGAACGGGTGGACCCG GCACTGCGCGACCCGACCTCCGAGATCGTGGCCCAGACGCGCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
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|---|---|
| InterPro Database:interpro:38.0 |
IPR001411 Tetracycline resistance protein TetB/drug resistance transporter (Family)
IPR005829 Sugar transporter, conserved site (Conserved_site)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP | No significant hit |
| TMHMM |  ![[21-43] Transmembrane (i-o)](../../img/C.gif "[21-43] Transmembrane (i-o)"){kind=small} ![[58-77] Transmembrane (o-i)](../../img/G.gif "[58-77] Transmembrane (o-i)"){kind=small} |
![[27-51] 4.89999951782359e-05 PR01036](../../img/F.gif "[27-51] 4.89999951782359e-05 PR01036"){kind=small}
![[78-94] PS00216](../../img/P.gif "[78-94] PS00216"){kind=small}
![[31-423] 8.00000000000001e-52 PF07690](../../img/H.gif "[31-423] 8.00000000000001e-52 PF07690"){kind=small}
![[1-474] 4.50001022902825e-75 SSF103473](../../img/B.gif "[1-474] 4.50001022902825e-75 SSF103473"){kind=small}
![[24-479] PS50850](../../img/M.gif "[24-479] PS50850"){kind=small}
