Niger_00020 : CDS information
Location
Organism | Streptomyces violaceusniger |
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Strain | DSM 4137 |
Entry name | Nigericin |
Contig | DQ354110 |
Start / Stop / Direction | 1,475 / 8,722 / + [in whole cluster] 1,475 / 8,722 / + [in contig] |
Location | 1475..8722 [in whole cluster] 1475..8722 [in contig] |
Type | CDS |
Length | 7,248 bp (2,415 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase |
Product (GenBank) | NigAI |
Gene | |
Gene (GenBank) | nigAI |
EC number | |
Keyword | |
Note | |
Note (GenBank) |
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Reference |
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PKS/NRPS Module
0 | malonyl-CoA | |
1 | methylmalonyl-CoA |
Sequence
>polyketide synthase [NigAI] MDSAAPTRTPQQAEPIAVVGMACRLPHAPSPSAFWRLLRQGGNAITTLPDDRRRTGTATT DGPDRPAPTWYGGFLDRVDTFDAAFFGIAPREATAMDPQQRLMLELAWEAFEDAGIRPGT LKDSPTGVFVGAIWDEYATLLRRDTATANRHAMTGVHRSIIANRVSYGYGLRGPSLTVDT AQSSSLVAVHTACESLRRRECTLALAGGVNLILTEDSMAAAAAQFGGLSPDGRCHTFDAR ANGFVRGEGGATVLLKPLTAAVRDGDAVYCVIHAGAVNNDGATDGLTAPSAAAQEDVVRT AHRRAGVAPDEVQYIELHGTGTPVGDPVEAAALGAALGTARTDGTPLPVGSAKTNVGHLE GAAGIVGLLKTALAIRHRRLPASLHFTTPNPRIPLTELGLRVQDRLTDWPHPNRPLLAGV SSFGMGGTNCHLVLGEAPAPESAPLSAHPSPPVVAWPISAKTPKALRAQAGRLRDHLADH PDLTPADIAHSLATTRTAFGHRAVILGEGSDELLSGLNALAEGTETAGVVRGRTMDGGLA FLFSGQGSQRAAMGHELYAAHPVFATALDEVCDCLDQRLTEPLREVLAAQAPSPRAALLD HTSYTQPALFAIEVALYRLAESWGITPGHLLGHSVGEIAAAHVAGVLTLPDACALVAARG RLMQAVTAKGAMAALHADADEAAGLLAGWADRLDIAAVNGPSSVVISGDHDAVHEAAAVW RERGRKARLLKVGHAFHSPHMDGMLDELRAVAAGLTFSAPAIPLVSNVTGRLATASELAS PDYWARHARHAVRFMDGVHTLLDAGVTTFLELGPDAPLTAMTRECLTARQEPAPGRPRPA AVAALRRDRPEVRTFAAAMAQAYVHGAEVAWDQACGGQPRRRVALPTYAFQRDRHWPGTT PESTVRATHTSGTDDAPDPAPPTEETAGPGEAGPDRDPLDTVRTHVALVLGHSDPGAIDP GLTFKELGFDSLAATELSERLGAATGLPLTATLTFDHPTPLAVADHLRARTTPATGPSAT PPAATTPAPRDTDEPIAVVAMGCRYPGGVDSPEALWRLVAEGADAIGEFPRDRGWDLAAL FDPDPERPGTSHAHEGGFLHDASEFDAEFFGISPREALATDPQQRLLLETAWETFERAGI RSTALRSSPTGVFVGVTSQDYGPRLHEAPKGLDGHLLTGGTPSVASGRVAFTFGLEGPAV SVDTACSSSLVAVHLAVRALRQGECTLALAGGVTVMAAPGMFTGFSRQRGLAPDGRCKPF AAAADGTGWGEGVGLLLLERLSDARRDGHRVLAVIRGSAVNQDGASNGLTAPNGPSQQRV IRQALADARLSPSEVDAVEAHGTGTTLGDPIEAQALLATYGRQRPGDRPLWLGSLKSNIG HTQAAAGVAGVIKMVMAMRHGLLPATLHIDAPSPHVNWDGGAVRLLTERVEWRRDEHPRR AGVSSFGISGTNAHLILEQAPEPGPAPSGARTDEGHRPVPWVLSARSAEALRGQARELAA RTAADHTAADHTPSPLDVGWSLITTRTAFEHRAVVVGGDRAELTAALQSLAADETHPGVV GPDVTRSGAAADPGPVLVFPGQGSQWAGMGAGLLDASPVFAARVAECERALAPHVDWSLT DVLRGAEGAAELSRVDVVPPVLWAAMVSLAAVWAEYGVRPPAVVGHSQGEIAAAVVAGAL SLEDGAKVVALRSKALRRLAGGGAMASLALGHERTEELLSGLGDRAAAVVVAVVNGPEST VVSGPPEQVAAAVTACREADERARLIEVNYASHSPQVDEIAHELIELLGGVEPVEVSGSG VAFYSTVTGGRADVSVLDTGYWVRNLRERVRFAEAIQALLADGHRVFIEASTHPVLTMAM RESFEHADSGAAAVPTLRRDHGDLAQLTKSVARAFLAGAEVDWSAAFPADPTPCTVDLPT YAFQRRRYWLDAPGGPGGDPRALGLAAADHPLLGAAVRLADGSGHVLTGRLSPQTHGWLA DHVVAGVALVPAAALMEWALRAADESGCGAVEELALRLPLVMPTTGGRCVQVMVGPPADD GRRDLAIYSLPEEALRTGGDTDWMCHAVGVLGPAVPESGATEPPGTWPPPEAELMDTDGF YERIAASGYAYGAAFQGLRAVWRDGADLVADVELPKAAGEPGGFGIHPALLDAALHPTLL TGHLDSGPEHTGERMWLPFTVSGVSLWAAEATAVRVRLTPGSRPAEGERELRVVVADAVG APVLTIDALVLRPAEADQLRSLNTGRVATAGGGSGGVRRRAAAAAGVSSVDWAARLARLS AVDRYRTLLGLVREHAATVLGHTDAEAVHADANFKELGFDSLTAVELRDRLAAATGLRLP AALIFRYPTPEGIAHHLVRRLSTDGTAATPTATVPPNTSTRLPRQPTDEMSAAQRLESAS ADQVLEFIDNELGVS
>polyketide synthase [NigAI] ATGGATAGCGCCGCGCCCACCCGGACACCCCAGCAAGCGGAGCCCATCGCCGTGGTGGGC ATGGCCTGCCGCCTGCCGCACGCACCCAGCCCGTCGGCCTTCTGGCGGCTGCTGCGGCAG GGCGGGAACGCCATCACCACCCTGCCGGACGACCGCCGCCGGACCGGCACCGCCACCACC GACGGCCCCGACCGGCCGGCCCCGACCTGGTACGGCGGTTTCCTGGACCGCGTCGACACC TTCGACGCCGCCTTCTTCGGCATCGCGCCCCGCGAGGCCACGGCCATGGACCCCCAGCAA CGGCTGATGCTCGAACTCGCCTGGGAGGCGTTCGAGGACGCGGGAATCCGCCCCGGAACA CTGAAGGACAGCCCCACCGGTGTGTTCGTCGGCGCCATCTGGGACGAGTACGCCACCCTC CTGCGCCGGGACACCGCCACGGCCAACCGGCACGCCATGACCGGCGTCCACCGCAGCATC ATCGCCAACCGGGTGTCCTACGGCTACGGTCTGCGCGGCCCGAGCCTCACCGTCGACACC GCACAGTCCTCCTCACTGGTGGCCGTGCACACCGCCTGCGAGTCCCTGCGCCGCCGGGAG TGCACCCTGGCGCTGGCCGGTGGCGTCAACCTCATCCTCACCGAGGACAGCATGGCGGCC GCCGCCGCCCAGTTCGGCGGGCTCTCGCCGGACGGCCGCTGCCACACCTTCGACGCCCGC GCCAACGGCTTCGTCCGAGGTGAGGGCGGTGCGACGGTACTGCTCAAGCCCCTGACCGCG GCCGTACGCGACGGCGACGCGGTGTACTGCGTCATCCACGCCGGGGCCGTCAACAACGAC GGCGCCACCGACGGGCTGACCGCCCCCAGCGCGGCGGCCCAGGAGGACGTGGTGCGCACC GCACACCGCCGGGCCGGAGTCGCACCCGACGAGGTCCAGTACATCGAGCTGCACGGCACC GGAACCCCCGTCGGCGACCCCGTCGAAGCGGCGGCCCTCGGCGCCGCGCTCGGCACCGCC CGGACGGACGGCACACCGCTGCCCGTCGGCTCCGCCAAGACCAACGTGGGCCACCTCGAA GGCGCCGCCGGCATCGTCGGACTGCTCAAGACCGCCCTCGCCATCCGGCACCGCCGGCTC CCGGCCAGCCTCCACTTCACCACCCCGAACCCGCGGATCCCGCTGACCGAGCTCGGACTG CGGGTCCAGGACCGGCTCACCGACTGGCCCCACCCAAACCGGCCACTGCTCGCCGGGGTC AGCTCCTTCGGCATGGGCGGCACCAACTGCCATCTGGTCCTCGGCGAAGCACCCGCGCCG GAGTCCGCGCCCCTGTCAGCGCACCCCTCGCCACCCGTGGTGGCCTGGCCGATCTCCGCG AAGACCCCCAAGGCGCTGCGCGCCCAGGCCGGGCGGCTGCGCGACCACCTCGCGGACCAC CCCGACCTCACTCCGGCCGACATCGCACACTCCCTGGCCACCACCCGGACCGCCTTCGGC CACCGCGCCGTGATCCTCGGCGAGGGCTCGGACGAGCTGCTGAGCGGGCTGAACGCGCTG GCCGAGGGCACGGAGACCGCAGGAGTGGTGCGGGGCAGGACCATGGACGGCGGCCTCGCC TTCCTCTTCAGCGGCCAGGGCAGCCAACGGGCGGCCATGGGCCATGAGCTGTACGCGGCC CATCCGGTCTTCGCCACGGCGCTGGACGAGGTGTGCGACTGCCTGGACCAGCGGCTGACG GAGCCGCTGCGCGAAGTGCTGGCCGCCCAAGCCCCCTCGCCGCGGGCGGCGTTGCTCGAC CACACCTCGTACACCCAGCCCGCGCTGTTCGCCATCGAGGTGGCCCTGTACCGGCTGGCC GAATCCTGGGGAATCACCCCCGGCCATCTGCTGGGCCACTCGGTCGGCGAGATCGCCGCC GCCCATGTGGCCGGTGTGCTCACCCTGCCGGACGCCTGCGCCCTGGTGGCCGCACGCGGC CGTTTGATGCAGGCGGTCACGGCGAAGGGCGCCATGGCCGCGCTGCACGCCGACGCCGAC GAGGCCGCCGGACTTCTCGCCGGATGGGCGGACCGGCTGGACATCGCCGCCGTCAACGGC CCCTCCTCCGTGGTGATTTCGGGCGACCACGACGCGGTCCACGAGGCCGCCGCCGTCTGG CGTGAACGCGGCCGCAAGGCCCGGCTGCTGAAGGTCGGCCACGCCTTCCACTCACCGCAC ATGGACGGCATGCTCGACGAATTGCGCGCCGTCGCCGCCGGGCTGACCTTCTCCGCACCG GCCATCCCCCTCGTCTCCAATGTGACGGGACGGCTCGCCACCGCCTCGGAGCTCGCCTCA CCGGACTACTGGGCCCGGCACGCCCGCCACGCGGTGCGCTTCATGGACGGTGTGCACACC CTTCTGGACGCCGGGGTCACCACCTTCCTCGAACTCGGACCGGACGCCCCGCTCACCGCC ATGACCCGCGAATGCCTCACCGCACGGCAGGAACCGGCTCCCGGGCGGCCGCGCCCGGCC GCCGTGGCGGCGCTGCGCCGCGACCGTCCCGAGGTGCGCACCTTCGCCGCCGCCATGGCC CAGGCGTATGTCCACGGCGCCGAGGTGGCCTGGGACCAAGCCTGCGGCGGGCAGCCCCGG CGGCGCGTCGCCCTGCCGACGTATGCCTTCCAGCGCGACCGCCACTGGCCCGGCACCACA CCCGAATCCACCGTGCGGGCCACACACACCTCCGGGACGGACGACGCCCCGGACCCGGCG CCGCCCACGGAAGAGACGGCCGGGCCCGGCGAAGCGGGGCCGGACCGCGATCCGCTGGAC ACCGTGCGGACCCATGTGGCCCTCGTCCTCGGGCACTCCGACCCCGGCGCCATCGATCCC GGCCTTACCTTCAAGGAGCTGGGCTTCGACTCGCTCGCGGCGACCGAACTGAGCGAACGG CTCGGCGCGGCCACCGGGCTGCCCCTGACCGCCACGCTCACCTTCGACCACCCCACACCC CTGGCCGTCGCCGACCATCTGCGCGCCCGGACCACCCCCGCCACCGGCCCGTCCGCCACT CCACCCGCGGCAACGACCCCCGCACCGCGCGATACCGACGAGCCGATCGCCGTGGTGGCC ATGGGCTGCCGCTACCCGGGCGGGGTCGACTCGCCCGAGGCCCTGTGGCGGCTGGTGGCC GAGGGCGCGGACGCGATCGGGGAGTTCCCCCGCGACCGCGGCTGGGACCTGGCCGCACTG TTCGACCCCGACCCGGAACGCCCCGGCACCAGCCACGCCCACGAGGGCGGCTTCCTCCAC GACGCGTCCGAATTCGACGCGGAGTTCTTCGGGATCAGCCCCCGGGAGGCGCTGGCCACC GATCCCCAGCAACGGCTGCTGCTGGAAACCGCGTGGGAGACCTTCGAACGGGCGGGCATC CGCTCCACCGCCCTCCGGTCCAGCCCGACCGGGGTGTTCGTCGGCGTGACGTCCCAGGAC TACGGCCCCCGGCTGCACGAGGCGCCCAAGGGGCTCGACGGCCATCTGCTGACCGGTGGC ACCCCGAGTGTGGCGTCCGGCCGGGTGGCGTTCACCTTCGGCCTGGAAGGGCCCGCGGTG TCGGTGGACACGGCGTGTTCGTCCTCGCTCGTGGCCGTCCATCTGGCGGTACGGGCACTG CGGCAGGGGGAGTGCACCCTGGCGCTGGCCGGAGGGGTGACGGTGATGGCCGCGCCCGGC ATGTTCACCGGCTTCTCCCGCCAGCGTGGCCTGGCCCCCGACGGGCGGTGCAAGCCGTTC GCGGCGGCCGCCGACGGCACCGGCTGGGGCGAGGGCGTCGGCCTGCTGCTCCTGGAGCGG CTGTCCGACGCCCGGCGCGACGGCCATCGGGTGCTGGCGGTGATCCGTGGCTCGGCCGTC AACCAGGACGGCGCCTCCAACGGGCTGACCGCGCCCAACGGCCCCTCCCAGCAGCGGGTG ATCCGCCAGGCCCTCGCCGACGCCCGGCTGTCGCCATCCGAGGTCGACGCCGTCGAGGCC CATGGCACCGGAACCACCCTCGGCGACCCGATCGAGGCCCAGGCCCTGCTCGCCACCTAC GGCCGACAGCGGCCCGGGGACCGGCCCCTGTGGCTGGGCTCGCTGAAGTCCAACATCGGC CACACCCAGGCCGCGGCCGGAGTGGCGGGCGTCATCAAGATGGTGATGGCCATGCGCCAC GGACTGCTGCCGGCCACCTTGCACATCGACGCGCCCAGCCCGCATGTCAACTGGGACGGC GGCGCGGTACGGCTGCTGACCGAGCGGGTGGAGTGGCGGCGCGACGAACACCCCCGGCGC GCGGGAGTGTCCTCCTTCGGCATCAGCGGCACCAACGCCCATCTGATCCTGGAACAGGCC CCCGAGCCGGGCCCCGCCCCCAGTGGCGCGCGGACGGATGAGGGTCACCGGCCGGTGCCC TGGGTGCTGTCCGCCCGGAGCGCCGAGGCCCTCCGGGGCCAGGCCCGGGAGCTGGCCGCT CGTACGGCCGCCGATCACACGGCAGCCGACCACACGCCATCGCCTCTGGACGTGGGCTGG TCGCTGATCACCACGCGGACGGCCTTCGAGCACCGCGCGGTGGTGGTCGGCGGGGACCGG GCTGAACTCACCGCCGCCCTCCAGTCACTGGCGGCCGACGAAACCCACCCGGGCGTGGTG GGCCCGGACGTCACCCGCTCCGGTGCGGCGGCCGACCCGGGCCCGGTGCTGGTGTTCCCC GGCCAGGGCTCGCAGTGGGCCGGAATGGGCGCCGGACTGCTGGACGCCTCACCGGTGTTC GCCGCCCGGGTGGCGGAGTGCGAACGGGCGCTCGCACCCCACGTCGACTGGTCGCTCACC GATGTCCTGCGGGGCGCCGAGGGCGCCGCCGAGCTGAGCCGGGTGGATGTGGTGCCGCCG GTGCTCTGGGCGGCGATGGTGTCACTGGCCGCCGTATGGGCCGAGTACGGTGTTCGCCCC CCCGCCGTGGTGGGCCACAGCCAGGGCGAGATCGCCGCGGCCGTGGTGGCGGGAGCGCTG TCCCTGGAGGACGGCGCGAAGGTCGTGGCGCTCCGCAGCAAGGCATTGCGGCGGCTGGCC GGAGGCGGGGCCATGGCCTCGCTGGCACTGGGCCACGAACGGACGGAGGAACTGCTGTCC GGGCTCGGCGACCGGGCCGCCGCGGTGGTGGTGGCGGTGGTGAACGGCCCCGAGTCCACT GTCGTCTCCGGGCCGCCGGAACAGGTGGCCGCGGCCGTGACCGCCTGCCGGGAGGCGGAC GAGCGGGCGCGCCTGATCGAGGTGAACTATGCCTCACACAGCCCCCAGGTCGATGAGATC GCGCACGAACTCATCGAGCTGCTCGGGGGAGTTGAGCCGGTCGAGGTGTCCGGGTCCGGG GTGGCGTTCTATTCGACGGTGACCGGTGGCCGGGCCGATGTCTCCGTTCTGGACACGGGC TACTGGGTGCGGAATCTGCGGGAGCGGGTGCGGTTCGCCGAGGCGATTCAGGCGCTGCTG GCCGATGGCCACCGGGTGTTCATCGAGGCCAGCACCCACCCCGTCCTCACCATGGCGATG CGGGAGAGCTTCGAGCACGCGGACAGTGGCGCCGCCGCGGTGCCCACTCTGCGGCGGGAC CACGGCGACCTGGCCCAGCTGACCAAGTCGGTCGCGCGGGCGTTCCTCGCCGGGGCAGAG GTGGACTGGTCGGCCGCCTTCCCGGCCGACCCCACGCCTTGTACGGTCGATCTGCCCACG TACGCCTTCCAGCGGCGGCGCTACTGGCTGGACGCCCCCGGCGGGCCCGGCGGGGACCCC CGCGCCCTCGGCCTGGCCGCCGCGGACCATCCGCTGCTGGGCGCCGCGGTGCGGCTCGCC GACGGCAGTGGCCATGTGCTGACGGGACGACTGTCCCCACAGACGCACGGATGGCTCGCC GACCATGTGGTGGCGGGCGTGGCCCTGGTCCCCGCAGCCGCCCTGATGGAGTGGGCGCTG CGGGCGGCCGACGAGTCCGGCTGCGGTGCGGTGGAGGAACTCGCGCTGCGGCTGCCGCTG GTGATGCCCACGACGGGCGGCCGGTGTGTCCAGGTGATGGTCGGCCCGCCCGCCGACGAC GGACGCCGCGACCTCGCGATCTACTCCCTGCCCGAAGAGGCGCTTCGCACGGGCGGGGAC ACCGACTGGATGTGCCATGCCGTGGGCGTACTCGGCCCCGCCGTACCGGAAAGCGGAGCG ACGGAGCCGCCCGGGACATGGCCGCCACCCGAAGCAGAGCTCATGGACACCGACGGGTTC TACGAACGGATCGCCGCATCCGGATACGCCTATGGGGCGGCCTTCCAGGGGCTGCGCGCG GTATGGCGGGACGGTGCTGATCTGGTGGCCGATGTGGAGCTGCCCAAGGCCGCGGGAGAG CCCGGTGGATTCGGCATCCACCCCGCCCTGCTGGACGCGGCGCTGCATCCGACGCTGCTG ACCGGCCACCTCGATTCCGGGCCGGAACACACCGGGGAGCGGATGTGGCTGCCGTTCACC GTGAGCGGCGTGTCCCTGTGGGCGGCCGAGGCCACCGCCGTACGGGTCAGACTCACCCCG GGTTCACGGCCCGCCGAGGGCGAGCGTGAACTGCGGGTCGTCGTCGCGGACGCCGTGGGA GCCCCGGTGCTCACGATCGACGCGCTGGTGCTGCGCCCCGCCGAGGCCGATCAGCTGCGC TCCCTGAACACCGGCCGGGTGGCCACCGCCGGCGGTGGCAGCGGTGGTGTACGGCGGCGG GCCGCTGCCGCCGCCGGAGTGTCGTCCGTCGACTGGGCCGCACGGCTGGCACGGCTGTCG GCCGTCGATCGATATCGCACGCTCCTCGGCCTGGTGCGCGAACACGCCGCCACCGTGCTG GGGCACACCGACGCCGAGGCGGTGCACGCCGACGCCAACTTCAAGGAGCTGGGTTTTGAC TCCCTGACCGCTGTTGAACTGCGCGATCGCCTCGCGGCGGCCACGGGACTGCGGCTGCCC GCGGCCCTGATCTTCAGATATCCGACCCCGGAAGGCATCGCCCACCACCTTGTGCGGCGG CTGTCGACCGACGGCACCGCCGCCACCCCCACCGCGACCGTCCCTCCGAACACGAGCACG CGGTTGCCACGGCAGCCGACGGATGAAATGAGCGCGGCCCAAAGGCTGGAGTCCGCCTCC GCGGATCAGGTCCTTGAGTTTATTGACAACGAGCTTGGTGTGTCCTGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001227 Acyl transferase domain (Domain)
IPR006162 Phosphopantetheine attachment site (PTM)
IPR009081 Acyl carrier protein-like (Domain)
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR014043 Acyl transferase (Domain)
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase (Domain)
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR018201 Beta-ketoacyl synthase, active site (Active_site)
IPR020801 Polyketide synthase, acyl transferase domain (Domain)
IPR020806 Polyketide synthase, phosphopantetheine-binding domain (Domain)
IPR020807 Polyketide synthase, dehydratase domain (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
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SignalP | |
TMHMM | No significant hit |