Oxzol_00270 : CDS information

close this sectionLocation

Organism
StrainJA3453
Entry nameOxazolomycin
Contig
Start / Stop / Direction95,512 / 96,849 / + [in whole cluster]
95,512 / 96,849 / + [in contig]
Location95512..96849 [in whole cluster]
95512..96849 [in contig]
TypeCDS
Length1,338 bp (445 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.1 general function
Productputative cytochrome P450
Product (GenBank)cytochrome P450
Gene
Gene (GenBank)ozmV
EC number
Keyword
Note
  • This ORF is not involved in oxazolomycin biosynthesis.
Note (GenBank)
Reference
ACC
PmId
[20406823] Oxazolomycin biosynthesis in Streptomyces albus JA3453 featuring an "acyltransferase-less" type I polyketide synthase that incorporates two distinct extender units. (J Biol Chem. , 2010)
comment
oxazolomycin生合成遺伝子クラスターの報告。

orf(+1): Cytochrome P450

NCBI contig(EF552687)では、ozmVと表記されている。

生合成遺伝子の境界を決定するため、orf(-1), orf(-2), orf(-3)-orf(-5),orf(+1), orf(+2), orf(+3)-orf(+5)欠損株作製。
いずれもoxazolomycin 産生にいかなる影響も与えなかったことから、oxazolomycin生合成には関与しないと結論づけている。
Related Reference
ACC
O31440
PmId
comment
Bacillus subtilis
Cytochrome P450 152A1(cypC)

[PMID:10529095]
Sphingomonas paucimobilis由来Fatty acid alpha-hydroxylase(O24782)の配列を元に相同性検索。クローニング、酵素活性測定。
Bacillus subtilis (P450(BSbeta))はoxidantとしてhydrogen peroxideを利用しalpha- and beta-positionsでlong-chain fatty acidをヒドロキシル化することを示した。

[PMID:12519760]
結晶構造解析にてmetal ion-binding site決定。
ACC
O24782
PmId
[9295298] ( , )
comment
Pseudomonas paucimobilis
Fatty acid alpha-hydroxylase

Fatty acid alpha-hydroxylaseの解析。
相同性からP450の一種だが、今までにみつかっていないfamilyであることを証明。

close this sectionSequence

selected fasta
>putative cytochrome P450 [cytochrome P450]
MTCTGAPVPAGFWETPPPVHVTARVCVTQEDLMLDNTLPLLTRGYAWLPDLSRREGPGAV
RTRLMGKPAIALRGPAAVGFFYDEDHVRRRTALPEPVLATLFGKTAVHTLDGAEHRKRKE
LFIKVLKDTSGVTALAERVADEWERSCKEWSDRARVTLFDEVSVLITRAVCAWAGVPLTE
GPEGDARRTAQDLVLMVDGFATAGPRHWRARRARQRQEERLARLVEDIRSAGGKTTGEGG
PPTTAVEAVAVHRDADGELLEPRTAAVEILNIIRPTVAVTWYTVFGAHALHRNPSLRQRL
ATGGEGYARAFAHEVRRFYPFAPFVAGLAPRDVEWHGEHIAEGSLVLLDLYGQNHDPELW
EAPYTFDPERFVGREPGRDELVPQGGGEASQGHRCPGEDVTLAVLSTLLPRLARLDYRVP
DQDLRIPLNRMPTRPRSGFVIAETH
selected fasta
>putative cytochrome P450 [cytochrome P450]
GTGACATGCACGGGTGCCCCGGTTCCGGCAGGCTTCTGGGAGACGCCACCACCCGTCCAC
GTCACGGCCCGCGTATGTGTCACCCAGGAGGACCTCATGCTGGACAACACGCTGCCGCTC
CTGACGCGGGGCTACGCGTGGCTTCCCGATCTGAGCCGCCGCGAGGGTCCGGGCGCCGTC
CGCACCCGTCTGATGGGCAAGCCCGCCATCGCGCTGCGCGGCCCCGCCGCCGTCGGGTTC
TTCTACGACGAGGACCATGTACGCCGTCGCACGGCCCTGCCCGAACCCGTTCTCGCCACC
CTCTTCGGCAAGACCGCGGTGCACACCCTGGACGGGGCGGAGCACCGTAAACGCAAGGAA
CTGTTCATCAAGGTGCTCAAGGACACCTCCGGCGTCACCGCATTGGCGGAGCGGGTCGCC
GACGAGTGGGAGCGGTCCTGCAAGGAGTGGTCCGACCGGGCCAGGGTGACGCTCTTCGAC
GAGGTGAGTGTCCTGATCACCCGGGCCGTGTGCGCCTGGGCGGGGGTCCCGCTCACCGAA
GGACCCGAGGGCGACGCGCGGCGGACCGCCCAGGACCTGGTCCTCATGGTCGACGGTTTC
GCCACGGCGGGCCCGCGGCACTGGCGGGCCCGGCGCGCCAGGCAGCGCCAGGAGGAGCGG
CTGGCCCGGCTGGTCGAGGACATCAGGTCGGCCGGCGGCAAGACGACCGGCGAGGGCGGC
CCGCCGACCACCGCCGTGGAGGCCGTGGCCGTCCACCGGGACGCCGACGGCGAGCTCCTC
GAACCGCGTACGGCGGCGGTGGAGATCCTCAACATCATCCGGCCGACGGTCGCCGTCACC
TGGTACACGGTGTTCGGCGCCCACGCCCTGCACCGCAACCCGTCGCTGCGGCAGCGCCTG
GCCACGGGCGGGGAGGGCTACGCGCGAGCGTTCGCCCACGAGGTGCGGCGCTTCTACCCG
TTCGCACCGTTCGTCGCGGGCCTCGCCCCGCGCGACGTCGAATGGCACGGCGAGCACATC
GCCGAGGGCTCCCTGGTCCTCCTCGACCTGTACGGGCAGAACCACGACCCCGAGCTGTGG
GAGGCCCCGTACACCTTCGACCCCGAGCGGTTCGTGGGCCGCGAGCCGGGGCGCGACGAG
CTCGTGCCGCAGGGCGGCGGCGAGGCCTCCCAGGGGCATCGCTGCCCGGGCGAGGACGTC
ACGCTGGCGGTCCTGAGCACCCTGCTGCCGCGCCTGGCGCGGCTCGACTACCGGGTGCCC
GACCAGGATTTGCGCATCCCGTTGAACCGGATGCCCACCAGGCCGCGCAGCGGTTTCGTC
ATCGCGGAGACGCACTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR001128 Cytochrome P450 (Family)
 [17-445]  4.90001027782408e-53 SSF48264
SSF48264   Cytochrome_P450
 [307-387]  3.2e-11 PF00067
PF00067   p450
 [33-441]  2.1e-53 G3DSA:1.10.630.10
G3DSA:1.10.630.10   Cyt_P450
IPR002401 Cytochrome P450, E-class, group I (Family)
 [220-237]  3.50000235434314e-10 PR00463 [309-327]  3.50000235434314e-10 PR00463 [349-373]  3.50000235434314e-10 PR00463
PR00463   EP450I
SignalP
 [1-23]  0.163 Signal
Bacteria, Gram-positive   
TMHMM No significant hit
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