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Oxzol_00330 : CDS information

close this sectionLocation

Organism
StrainJA3453
Entry nameOxazolomycin
Contig
Start / Stop / Direction104,170 / 103,637 / - [in whole cluster]
104,170 / 103,637 / - [in contig]
Locationcomplement(103637..104170) [in whole cluster]
complement(103637..104170) [in contig]
TypeCDS
Length534 bp (177 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.1 general function
Productputative oxidoreductase
Product (GenBank)oxidoreductase
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in oxazolomycin biosynthesis.
Note (GenBank)
  • ozm orf +5
Reference
ACC
comment
UniProt登録されている[PMID:16707707]ではFigも含め、Oxzol_00330について記載なし。
続報にも見当たらない。
Related Reference
ACC
P77165
PmId
comment
Escherichia coli
Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit(yagT)

E.coliのxanthine dehydrogenase　yagT, yagS, yagR, yagQ operonのクローニングと特徴付け。
YagR(large) subunitがmolybdenum cofactor (Moco)を保存。YagS(medium) subunitがFADを保存、YagT(small) subunitは2つの[2Fe-2S]を保存していた。酵素活性も見ており、terminal electron acceptorとしてferredoxinを使用する。
ACC
P72223
PmId
[8798497] ( , )
comment
Pseudomonas putida
Quinoline 2-oxidoreductase(qorS)

large, medium, small3つのsubunitで構成されるoxidoreductaseで、それぞれqorL, qorM, qorSにコードされている。quinoline degradation活性を確認している。

close this sectionSequence

selected fasta
>putative oxidoreductase [oxidoreductase]
MGADVFHSEVPLRVNGEARRPTVDHRSTLLDVLREQLGLTGAKKGCDHGQCGACTVLVDG
RRVNSCLLLAVALEGCEVTTVEGLAPGEGDDLHPLQRAFVDRDAFQCGYCTPGQICSAVG
AIEEAGAGRASHVTDPAANRGAPVELTRDEIRERLSGNICRCGAYPHIVEAVEDVTR
selected fasta
>putative oxidoreductase [oxidoreductase]
ATGGGAGCCGATGTGTTCCACTCGGAAGTGCCCCTGAGAGTGAACGGCGAAGCCCGCCGC
CCCACCGTCGACCACCGCTCGACGCTGCTGGACGTCCTGCGCGAGCAGCTCGGCCTGACC
GGCGCCAAGAAGGGCTGCGACCACGGCCAGTGCGGTGCCTGCACCGTCCTCGTGGACGGG
CGCCGCGTCAACAGCTGTCTGCTGCTCGCGGTCGCCCTGGAGGGGTGCGAGGTCACCACC
GTCGAGGGGCTCGCCCCCGGCGAGGGCGACGACCTGCACCCGCTCCAGCGGGCCTTCGTC
GACCGCGACGCCTTCCAGTGCGGTTACTGCACCCCGGGGCAGATCTGTTCCGCCGTCGGC
GCCATCGAAGAGGCCGGGGCGGGCCGCGCCTCCCACGTGACGGACCCCGCCGCCAACAGG
GGTGCGCCCGTGGAGCTGACCAGGGACGAGATCCGGGAGCGGCTCAGCGGCAACATCTGC
CGCTGCGGCGCCTATCCGCACATCGTCGAGGCCGTCGAGGACGTGACGCGATGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR001041 2Fe-2S ferredoxin-type domain (Domain)
[7-85] 8.80000265836278e-28 SSF54292
SSF54292   Ferredoxin
[8-84] PS51085
PS51085   2FE2S_FER_2
[14-64] 1.5e-07 PF00111
PF00111   Fer2
IPR002888 [2Fe-2S]-binding (Domain)
[80-177] 9.5000102816722e-29 SSF47741
SSF47741   2Fe-2S_bind
[82-176] 2.5e-28 G3DSA:1.10.150.120
G3DSA:1.10.150.120   2Fe-2S-bd
[80-173] 6.3e-30 PF01799
PF01799   Fer2_2
IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site (Binding_site)
[46-54] PS00197
PS00197   2FE2S_FER_1
IPR012675 Beta-grasp domain (Domain)
[9-81] 8.89999999999994e-31 G3DSA:3.10.20.30
G3DSA:3.10.20.30   Ferredoxin_fold
SignalP No significant hit
TMHMM No significant hit
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