Oxzol_00310 Oxzol_00310   Oxzol_00330 Oxzol_00330

Oxzol_00320 : CDS information

close this sectionLocation

Organism
StrainJA3453
Entry nameOxazolomycin
Contig
Start / Stop / Direction103,640 / 102,645 / - [in whole cluster]
103,640 / 102,645 / - [in contig]
Locationcomplement(102645..103640) [in whole cluster]
complement(102645..103640) [in contig]
TypeCDS
Length996 bp (331 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.1 general function
Productputative oxidoreductase
Product (GenBank)oxidoreductase
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in oxazolomycin biosynthesis.
Note (GenBank)
  • ozm orf +4
Reference
ACC
comment
UniProt登録されている[PMID:16707707]ではFigも含め、Oxzol_00320について記載なし。
続報にも見当たらない。
Related Reference
ACC
O33820
PmId
[9490068] ( , )
comment
Thauera aromatica
4-hydroxybenzoyl-CoA reductase subunit beta(hcrB)

4-Hydroxybenzoyl-CoA reductaseは、hcrA, hcrB, hcrC subunitで構成される。クローニングと機能解析。
alpha-subunit (HcrA) はMo-cofactor-binding site保存。beta-subunit (HcrB)はおそらく付加的なiron-sulfur cluster。gamma-subunit (HcrC)は2つの[2Fe-2S] clusterをもつ。
ACC
P19914
PmId
comment
Hydrogenophaga pseudoflava
Carbon monoxide dehydrogenase medium chain(cutM)

Carbon monoxide dehydrogenases (CO-DH)をコードするcutM, cutS, cutLで構成される3つの遺伝子を同定。酵素精製時に活性を確認している。
Fluorometric analysisから、このCO-DHのlarge、medium subunitはmolybdoprotein とFAD cofactorに結合し、また、この酵素のiron-sulfur centerはsmall subunitにあるということをが判明。

close this sectionSequence

selected fasta
>putative oxidoreductase [oxidoreductase]
MKSFRYLRAHSVDEATAAHAGRPGSRYLGGGTNLVDLMKTGVERPETLIDVSRLPLDAVE
ELSDGSVRAGAAVRNSDLAAHPLVRDRYPVLAQALLSGASGQLRNAATTGGNLLQRTRCP
YFQDLGKPCNKREPGSGCGARDGVHRDHAVLGHSPQCIATHPSDMAVALAALDAQVELHG
AKGRRTVPAAEFHRLPGDRPDLDTEIAPGELITGVRLPATTAGLPSAYRKARDRASYAFA
LASVAVVLDVEDSRVREVRIAFGGLAHRPWRALRAERALLGGPVTEEAFRQAVDEELAAA
EPLPDNAFKVPLARNIACDVLRRLSTASAAA
selected fasta
>putative oxidoreductase [oxidoreductase]
ATGAAGTCCTTCAGGTATCTGCGCGCCCACAGCGTCGACGAGGCGACCGCGGCGCACGCG
GGGCGCCCCGGCTCCCGCTATCTCGGCGGCGGCACCAACCTCGTCGACCTGATGAAGACG
GGCGTGGAGCGGCCCGAGACGCTGATCGACGTCAGCAGGCTGCCGCTGGACGCGGTCGAG
GAGCTGTCCGACGGCTCGGTGCGGGCCGGGGCGGCGGTGCGCAACAGCGACCTCGCCGCC
CACCCGCTGGTGCGCGACCGCTACCCCGTCCTCGCCCAGGCGCTGCTCTCGGGCGCGTCG
GGGCAGCTCCGCAACGCGGCGACGACCGGCGGCAACCTGCTCCAGCGCACCCGCTGCCCC
TACTTCCAGGACCTGGGCAAGCCGTGCAACAAGCGGGAGCCCGGCAGCGGCTGCGGTGCC
CGTGACGGCGTCCACCGCGACCACGCGGTGCTCGGGCACTCGCCGCAGTGCATCGCCACG
CACCCCTCCGACATGGCGGTCGCCCTCGCCGCGCTCGACGCCCAGGTGGAGCTGCACGGG
GCGAAGGGCCGGCGGACCGTGCCCGCCGCCGAGTTCCACCGGCTGCCCGGGGACCGCCCC
GACCTGGACACCGAGATCGCGCCCGGTGAACTCATCACCGGCGTACGGCTCCCCGCCACG
ACGGCCGGCCTGCCCTCCGCCTACCGCAAGGCACGCGACCGCGCCTCGTACGCCTTCGCG
CTCGCCTCCGTGGCCGTGGTCCTCGACGTCGAGGACTCCCGCGTACGCGAGGTGCGGATC
GCGTTCGGCGGCCTCGCGCATCGGCCCTGGCGCGCGCTGCGCGCCGAACGCGCGCTGCTG
GGCGGCCCGGTGACCGAGGAGGCGTTCCGGCAGGCCGTCGACGAGGAGCTCGCCGCCGCC
GAACCGCTGCCGGACAACGCGTTCAAGGTGCCCCTCGCCCGCAACATCGCCTGCGACGTC
CTGCGGCGCCTGAGCACGGCGTCCGCCGCCGCCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR002346 Molybdopterin dehydrogenase, FAD-binding (Domain)
[3-219] 1.5e-53 PF00941
PF00941   FAD_binding_5
IPR005107 CO dehydrogenase flavoprotein, C-terminal (Domain)
[223-324] 1.10000150671642e-27 SSF55447
SSF55447   CO_deh_flav_C
[227-323] 2.5e-28 G3DSA:3.30.390.50
G3DSA:3.30.390.50   CO_DH_flav_C
[226-324] 4.60000044330862e-32 SM01092
SM01092   CO_deh_flav_C
[226-322] 3.09999999999998e-19 PF03450
PF03450   CO_deh_flav_C
IPR016166 FAD-binding, type 2 (Domain)
[1-223] 2.50000909916183e-63 SSF56176
SSF56176   FAD-binding_2
[1-222] PS51387
PS51387   FAD_PCMH
IPR016167 FAD-binding, type 2, subdomain 1 (Domain)
[1-51] 3.60000000000001e-18 G3DSA:3.30.43.10
G3DSA:3.30.43.10   FAD-binding_2_sub1
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (Domain)
[61-113] 7.5e-34 G3DSA:3.30.465.10 [157-219] 7.5e-34 G3DSA:3.30.465.10
G3DSA:3.30.465.10   CO_DH_flavoprot_FAD-bd_sub2
SignalP
[1-20] 0.261 Signal
Bacteria, Gram-negative   
TMHMM No significant hit
Oxzol_00310 Oxzol_00310   Oxzol_00330 Oxzol_00330
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