Pact_00070 Pact_00070   Pact_00090 Pact_00090

Pact_00080 : CDS information

close this sectionLocation

Organism
StrainATCC 27456 (=NBRC 13433)
Entry namePactamycin
Contig
Start / Stop / Direction11,708 / 11,172 / - [in whole cluster]
11,708 / 11,172 / - [in contig]
Locationcomplement(11172..11708) [in whole cluster]
complement(11172..11708) [in contig]
TypeCDS
Length537 bp (178 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
GenepctG
ptmE
Gene (GenBank)pctG
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[17827660] Cloning of the pactamycin biosynthetic gene cluster and characterization of a crucial glycosyltransferase prior to a unique cyclopentane ring formation. (J Antibiot (Tokyo). , 2007)
[19670201] Deciphering pactamycin biosynthesis and engineered production of new pactamycin analogues. (Chembiochem. , 2009)
comment
[PMID:17827660]
Pactamycin生合成遺伝子クラスターの報告。

PctG: unknown

PctGの機能解析はされていない。
連続した遺伝子産物PctG(このORF)とPctH(Pact_00090)はpactamycin生合成を協調的に制御するのではないかと推定している。


[PMID:19670201]
S.pactum ATCC27456のPactamycin生合成遺伝子クラスターの報告。

PtmE: hyothetical protein

PtmEの機能解析はされていない。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MRVVVITGAPGVGKTRLGHQLVARYGVPAAAVDCDPVVYPWDGNESLYALMAATVRASLP
VYRDWGARVVVLSGVVLAGRAYEPLHRVFADLGADPVYYGLRAAPEALAARISGDPGGEH
FVEGRLAERHLDEEVPGVPGIRLIDTTELTLAAATDAVAAAEFADLGPGWLPDPRVIS
selected fasta
>hypothetical protein [hypothetical protein]
ATGCGCGTGGTGGTGATCACCGGTGCCCCGGGCGTGGGCAAGACCCGCCTGGGGCACCAG
CTGGTGGCCCGGTACGGCGTGCCGGCCGCCGCGGTGGACTGCGACCCGGTCGTCTACCCG
TGGGACGGCAACGAGAGCCTGTACGCCCTGATGGCCGCGACGGTCCGGGCGTCCCTCCCG
GTCTACCGGGACTGGGGCGCCCGGGTGGTGGTGCTCAGCGGAGTGGTCCTGGCCGGCCGC
GCCTACGAGCCCCTCCACCGGGTCTTCGCCGACCTGGGCGCCGACCCGGTCTACTACGGC
CTGCGCGCCGCCCCGGAGGCGCTCGCCGCCCGGATCAGCGGCGATCCGGGCGGCGAGCAC
TTCGTCGAGGGCCGGCTCGCCGAGCGCCACCTCGACGAGGAGGTGCCCGGCGTGCCCGGC
ATCCGGCTCATCGACACCACCGAGCTGACGCTGGCGGCGGCGACCGACGCGGTCGCCGCC
GCCGAGTTCGCCGATCTGGGGCCCGGCTGGCTGCCGGACCCCCGGGTGATCAGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0 		No significant hit
SignalP No significant hit
TMHMM No significant hit
Pact_00070 Pact_00070   Pact_00090 Pact_00090
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