Rimoc_00020
Rimoc_00030 : CDS information
Location
| Organism | Streptomyces diastaticus |
|---|---|
| Strain | 108 |
| Entry name | Rimocidin |
| Contig | AY442225 |
| Start / Stop / Direction | 3,375 / 5,024 / + [in whole cluster] 3,375 / 5,024 / + [in contig] |
| Location | 3375..5024 [in whole cluster] 3375..5024 [in contig] |
| Type | CDS |
| Length | 1,650 bp (549 aa) |
Annotation
| Category | 5.2 function unknown |
|---|---|
| Product | putative cholesterol oxidase |
| Product (GenBank) | RimD |
| Gene | |
| Gene (GenBank) | rimD |
| EC number | 1.1.3.6 |
| Keyword | |
| Note | |
| Note (GenBank) |
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| Reference |
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| Related Reference |
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Sequence
>putative cholesterol oxidase [RimD] MIENQHLSRRRLLGLAALGGAAVAGMTTISVAPRAAAAGQGSPRAGDGAFVPAVVIGTGY GAAVSALRLGEAGIPTLMLEMGQLWNKPADDGNIFCGMLKPDRRSSWFKSRTEAPLGSFL WLDVINRNIDPYAGVLDKVHFDEMSVYVGRGVGGGSLVNGGMAVVPKRSYFEEVLPRVDA AQMYDRYFPRANSMLKVNHIDKGWFEDTEWYKYARVSREQAGKAGLSTTFVPNVYDFDHM RREADGTAPKSALAGEVIYGNNHGKQSLDKTYLAAALGTGKVTIETLHQVKAIRRQPDGS YVLSVVQSDADGKTIAQKEIGCRHLFLGAGSLGSTELLVRARDTGTLPELNAEVGAGWGP NGNIMTGRANHVWNPTGAHQSSIPALGIDDWDNPAAPVFAEIAPMPAGLETWVSLYLAIT KNPERGTFVYDKATDRAKLRWTRDQNTPAVNAAKSLFDRINKANTTMYRYDLFGSQLKNF SDDFSYHPLGGCVLGKATDLYGRVAGYQNLYVMDGALVPGSIGVNPFVTITALAERNIER IIAEDVKAA
>putative cholesterol oxidase [RimD] GTGATCGAGAACCAGCACCTGTCACGGCGCCGTCTGCTCGGACTGGCCGCCCTCGGCGGC GCCGCCGTCGCCGGAATGACCACGATTTCCGTCGCCCCGCGCGCCGCGGCCGCCGGGCAG GGAAGCCCGCGGGCCGGTGACGGCGCGTTCGTACCGGCGGTGGTGATCGGCACCGGTTAC GGTGCGGCGGTCTCCGCGCTGCGGCTCGGCGAGGCGGGAATTCCGACGCTCATGCTCGAA ATGGGCCAGCTGTGGAACAAGCCGGCCGACGACGGCAACATCTTCTGCGGAATGCTCAAG CCCGACCGCAGGTCCAGCTGGTTCAAGTCGCGCACCGAAGCCCCGCTGGGCTCGTTCCTG TGGCTGGATGTCATCAACCGCAACATCGACCCGTACGCGGGCGTCCTCGACAAGGTGCAC TTCGACGAGATGTCGGTGTACGTGGGACGGGGCGTCGGCGGCGGCTCGCTGGTCAACGGC GGCATGGCCGTCGTACCGAAGCGCTCGTACTTCGAAGAGGTCCTCCCACGGGTGGACGCC GCCCAGATGTACGACCGGTACTTCCCGCGCGCCAACTCCATGCTCAAGGTGAACCACATC GACAAGGGGTGGTTCGAGGACACGGAGTGGTACAAGTACGCGCGGGTCTCGCGCGAGCAG GCGGGCAAGGCGGGCCTGAGCACCACCTTCGTCCCCAACGTCTACGACTTCGACCACATG CGGCGCGAGGCGGACGGCACGGCGCCCAAGTCGGCGCTGGCCGGCGAGGTGATCTACGGC AACAACCACGGCAAGCAGAGCCTGGACAAGACCTATCTGGCCGCCGCGCTGGGCACCGGC AAGGTCACCATCGAGACGCTGCACCAGGTCAAGGCGATCCGGCGGCAGCCGGACGGCAGC TATGTGCTGTCCGTGGTGCAGAGCGACGCCGACGGCAAGACCATCGCGCAGAAGGAGATC GGCTGCCGCCACCTGTTCCTCGGCGCGGGCAGCCTCGGCTCCACCGAACTGCTGGTGCGC GCCCGCGACACCGGCACGCTGCCCGAGCTGAACGCCGAGGTCGGCGCGGGCTGGGGCCCC AACGGCAACATCATGACCGGCCGCGCCAACCACGTCTGGAACCCCACCGGGGCCCACCAG TCCTCGATCCCCGCCCTGGGCATCGACGACTGGGACAACCCGGCAGCCCCGGTCTTCGCG GAGATCGCGCCGATGCCGGCCGGCCTGGAGACCTGGGTCAGCCTCTACCTGGCGATCACC AAGAACCCCGAGCGCGGCACCTTCGTCTACGACAAGGCCACCGACCGGGCCAAACTGCGC TGGACCCGGGACCAGAACACCCCCGCGGTCAACGCCGCGAAGTCGCTGTTCGACCGGATC AACAAGGCCAACACGACGATGTACCGCTACGACCTGTTCGGTTCGCAGCTGAAGAACTTC TCCGACGACTTCAGCTACCACCCGCTCGGCGGCTGCGTCCTGGGCAAGGCCACCGACCTC TACGGCCGCGTCGCCGGCTATCAGAACCTCTACGTCATGGACGGCGCGCTCGTGCCGGGC TCCATCGGCGTCAACCCCTTCGTGACCATCACGGCCCTCGCCGAGCGCAACATCGAGCGG ATCATCGCGGAGGACGTCAAGGCCGCGTAA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal (Domain)
IPR006311 Twin-arginine translocation pathway, signal sequence (Conserved_site)
IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal (Domain)
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| SignalP |  ![[1-37] 1 Signal](../../img/R.gif "[1-37] 1 Signal"){kind=small} |
| TMHMM | ![[12-31] Transmembrane (i-o)](../../img/C.gif "[12-31] Transmembrane (i-o)"){kind=small} |
![[146-340] 5.7e-06 PF00732](../../img/H.gif "[146-340] 5.7e-06 PF00732"){kind=small}
![[149-172] PS00623](../../img/P.gif "[149-172] PS00623"){kind=small}
![[1-37] PS51318](../../img/M.gif "[1-37] PS51318"){kind=small}
