Sch475_00160 : CDS information
Location
Organism | Streptomyces sp. |
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Strain | SCC-2136 |
Entry name | Sch 47554 |
Contig | AJ628018 |
Start / Stop / Direction | 22,247 / 23,140 / + [in whole cluster] 22,247 / 23,140 / + [in contig] |
Location | 22247..23140 [in whole cluster] 22247..23140 [in contig] |
Type | CDS |
Length | 894 bp (297 aa) |
Annotation
Category | 4.1 transcriptional regulator |
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Product | putative AraC family transcriptional regulator |
Product (GenBank) | putative AraC-family transcriptional regulator |
Gene | |
Gene (GenBank) | schA16 |
EC number | |
Keyword | |
Note | |
Note (GenBank) | |
Reference |
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Family/Domain |
Sequence
>putative AraC family transcriptional regulator [putative AraC-family transcriptional regulator] MADISTQDADAGDGIRTFPFPVDLSVCGVGMQVGPMEPGRTWHANEAIERVHRIDFHVVM LFGDGPVRHMVDFTEYEVSAGELLWIRPGQVHRFSSTEAYRGTVLIMQPGFLPRATVEST GLYRYDLPPLLRPDPAQLAGLRAALAQLEREYVDTTTLPLSLHTSVLRHSLTAFLLRLAH LAASSADAARDQDQADTTFTRFREAVEKGFATNHSVSAYADALGYSRRTLVRAVRAATGE TPKGFIDKRVVLEAKRLLAHTDMPIGRIGVSVGFPDAANFTKFFHQHTGVAAGGVQG
>putative AraC family transcriptional regulator [putative AraC-family transcriptional regulator] ATGGCGGACATAAGCACCCAAGACGCCGACGCCGGCGACGGGATCAGGACCTTTCCCTTT CCCGTCGACCTGAGCGTCTGCGGAGTCGGCATGCAGGTCGGTCCGATGGAGCCCGGCCGG ACCTGGCACGCGAACGAGGCGATCGAGCGCGTCCACCGCATCGACTTCCACGTGGTCATG CTCTTCGGGGACGGCCCGGTCCGGCACATGGTCGACTTCACCGAGTACGAGGTCTCCGCC GGTGAGCTCCTGTGGATACGCCCCGGACAGGTCCACCGTTTCTCCAGCACGGAGGCCTAC CGCGGAACGGTCCTGATCATGCAGCCGGGCTTCCTGCCCCGCGCCACGGTCGAGTCGACC GGCCTCTACCGCTACGACCTGCCGCCCCTGCTCAGGCCCGACCCGGCCCAGCTCGCCGGA CTGAGGGCCGCCCTCGCCCAGCTGGAACGCGAGTACGTCGACACGACCACGCTGCCGCTC AGCCTGCACACCTCCGTGCTGCGGCACTCCCTGACGGCGTTCCTGTTGCGCTTGGCGCAC CTCGCGGCCAGCTCCGCCGACGCGGCACGCGACCAGGACCAGGCGGACACCACCTTCACC CGATTCCGCGAGGCCGTCGAGAAGGGCTTCGCCACCAACCACAGCGTCAGCGCGTACGCC GACGCCCTCGGCTACTCCCGCCGCACCCTCGTCCGGGCGGTCCGCGCCGCGACGGGCGAG ACCCCGAAGGGCTTCATCGACAAGCGGGTCGTCCTGGAGGCCAAGCGGCTCCTCGCCCAC ACGGACATGCCGATCGGCCGCATCGGGGTCTCGGTGGGCTTCCCCGACGCGGCCAACTTC ACCAAGTTCTTCCACCAGCACACCGGGGTGGCCGCCGGCGGCGTTCAGGGCTGA
Feature
BLASTP Database:UniProtKB:2011_09 |
|
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InterPro Database:interpro:38.0 |
IPR003313 Transcription regulator HTH, AraC, arabinose-binding/dimerisation (Domain)
IPR009057 Homeodomain-like (Domain)
IPR018060 DNA binding HTH domain, AraC-type (Domain)
|
SignalP | No significant hit |
TMHMM | No significant hit |