Madu_00510 Madu_00510   Madu_00530 Madu_00530

Madu_00520 : CDS information

close this sectionLocation

Organism
StrainATCC 39144
Entry nameMaduropeptin
Contig
Start / Stop / Direction79,465 / 80,091 / + [in whole cluster]
79,465 / 80,091 / + [in contig]
Location79465..80091 [in whole cluster]
79465..80091 [in contig]
TypeCDS
Length627 bp (208 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in maduropeptin biosynthesis.
Note (GenBank)
  • mdp rf4
Reference
ACC
PmId
[17918933] Characterization of the maduropeptin biosynthetic gene cluster from Actinomadura madurae ATCC 39144 supporting a unifying paradigm for enediyne biosynthesis. (J Am Chem Soc. , 2007)
comment
Maduropeptin生合成遺伝子クラスターの報告

orf4: Unknown

Maduropeptin生合成遺伝子クラスターは、遺伝子産物の推定機能よりmdpA1からmdpE2までとしている。
このORFについて機能解析はしていない。

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MAKNRENPVVLSRIYTRTGDEGTTALGDTSRTRKTDPRLAAYADVEEANAAIGAALSLGS
LPADVAALLVRVQNEMFDVGADLCAPVVPDPEYPPLRIEPSYIERLEADCDEQNEKLRPL
RSFILPGGAPGAALLHVARTVARRAERTAWAAVEAHGTAAVGDPEAAEGGVNPLAVQYLN
RLSDLLFILCRVANAEHGDILWKPGGER
selected fasta
>hypothetical protein [unknown]
ATGGCGAAGAACAGGGAGAACCCCGTCGTCCTGTCCCGGATCTACACCCGTACGGGCGAT
GAAGGGACGACCGCGCTCGGCGACACGTCCCGCACCCGCAAGACCGACCCGCGCCTGGCC
GCCTACGCCGACGTGGAGGAGGCCAACGCCGCGATCGGCGCCGCGCTCTCCCTCGGCTCC
CTGCCCGCGGACGTCGCCGCGCTCCTCGTCCGCGTGCAGAACGAGATGTTCGACGTCGGC
GCGGACCTGTGCGCACCGGTCGTCCCGGATCCCGAGTACCCGCCCCTGCGCATCGAGCCG
TCCTACATCGAGCGGCTCGAGGCCGACTGCGACGAGCAGAACGAGAAGCTGCGGCCGCTG
CGCAGCTTCATCCTGCCGGGCGGGGCCCCCGGCGCCGCGCTGCTGCACGTCGCGCGGACC
GTCGCGCGGCGCGCCGAACGCACCGCGTGGGCGGCGGTCGAGGCGCACGGCACCGCCGCC
GTGGGCGACCCCGAGGCCGCCGAGGGCGGCGTCAACCCGCTGGCCGTCCAGTACCTCAAC
CGCCTGTCGGACCTGCTGTTCATCCTCTGCAGGGTCGCGAACGCCGAGCACGGCGACATC
CTGTGGAAGCCCGGCGGCGAGCGCTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR002779 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type (Domain)
[14-194] 6.09999999999996e-52 PF01923
PF01923   Cob_adeno_trans
IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like (Domain)
[12-204] 1.49999648196323e-52 SSF89028
SSF89028   AdoCbl_synth_CblAdoTrfase-like
[23-207] 1.80000000000002e-57 G3DSA:1.20.1200.10
G3DSA:1.20.1200.10   AdoCbl_synth_CblAdoTrfase-like
IPR017858 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal (Domain)
[20-202] PD007457
PD007457   AdoCbl_syn_CblAdoTrfase_PduO_N
[15-198] 3.60000000000002e-44 TIGR00636
TIGR00636   PduO_Nterm
SignalP No significant hit
TMHMM No significant hit
Madu_00510 Madu_00510   Madu_00530 Madu_00530
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