C1027_00290
C1027_00300 : CDS information
Location
| Organism | Streptomyces globisporus |
|---|---|
| Strain | C-1027 |
| Entry name | C-1027 |
| Contig | AY048670 |
| Start / Stop / Direction | 36,160 / 37,485 / + [in whole cluster] 36,160 / 37,485 / + [in contig] |
| Location | 36160..37485 [in whole cluster] 36160..37485 [in contig] |
| Type | CDS |
| Length | 1,326 bp (441 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative major facilitator superfamily transporter |
| Product (GenBank) | citrate/shikimate transporter |
| Gene | sgcK |
| Gene (GenBank) | |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) |
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| Reference |
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| Related Reference | |
Sequence
>putative major facilitator superfamily transporter [citrate/shikimate transporter] MPAVNGSVQSGQSHRRSVVATVVGNFVESFDWLAYGLFAPLFAAQFFPSSNQFTSLLGAF AVFGTGMLFRPIGGVLLGRLADRRGRRPALMLAIGLMTGGSTLIAVVPTYEHIGILAPLL LLLARLAQGVSSGGEWTAAATYLMEIAPKNRRCLYSSLFSVTTMAGPFVASLLGAGLGVW LGTATMEAWGWRVPFLLGGVFGVILLFLRRRLTETEVFRREVRPRARRGSLGQLIGAHRP QVLLAVMLVAGLGVIGGTWSTAVPAMGHRLIGSQTMFWVVVCVTGSVILLQVPIGLLADR VEPGRFLIVSSVVFAAVGSYAYLTVQDSFASLAFTYSTGVIFLGCVTMVLPKMLSRIFPP QIRGLGIGLPHASTTALLGGAGPLLAAYSDERGASGWFIAAVMAAVLLAWPATLWERRLF RARTAPGSEPVPESAVARPVG
>putative major facilitator superfamily transporter [citrate/shikimate transporter] ATGCCCGCTGTCAATGGATCGGTGCAGTCAGGCCAGTCGCACCGACGCTCCGTCGTGGCG ACGGTGGTGGGCAACTTCGTGGAGTCGTTCGACTGGCTCGCCTACGGGCTCTTCGCTCCT CTCTTCGCGGCTCAGTTCTTCCCCTCGTCCAACCAGTTCACCTCCCTGCTCGGCGCGTTC GCGGTCTTCGGCACGGGCATGCTCTTCCGGCCGATCGGCGGGGTCCTGCTGGGCCGCCTC GCCGACCGGCGCGGCCGGCGCCCCGCCCTGATGCTGGCGATCGGACTGATGACCGGCGGC TCGACCCTGATCGCCGTCGTCCCCACCTACGAGCACATCGGGATCCTCGCCCCGCTGCTT CTGCTGCTCGCCCGGCTCGCCCAGGGAGTCTCCTCGGGCGGGGAATGGACAGCGGCGGCC ACCTACCTGATGGAGATCGCGCCGAAGAACCGCCGGTGCCTCTACAGCAGCCTCTTCTCC GTGACGACCATGGCGGGCCCCTTCGTCGCATCGCTGCTGGGCGCGGGCCTCGGCGTGTGG CTGGGAACCGCGACGATGGAGGCCTGGGGCTGGCGGGTGCCGTTCCTCCTCGGCGGCGTC TTCGGCGTGATCCTGCTGTTCCTGCGCCGTCGGCTCACCGAGACCGAGGTCTTCCGCCGG GAGGTGCGGCCCCGGGCCCGGCGCGGCTCACTGGGCCAGCTGATCGGAGCCCACCGCCCC CAGGTGCTGCTGGCCGTGATGCTGGTGGCCGGACTGGGCGTCATCGGCGGAACGTGGTCG ACCGCGGTCCCGGCGATGGGCCACCGTCTGATCGGCTCGCAGACGATGTTCTGGGTGGTG GTCTGTGTGACCGGCTCGGTCATCCTGCTGCAGGTACCCATAGGGCTGCTCGCCGACCGG GTGGAACCGGGCAGGTTCCTGATCGTCTCCAGCGTCGTCTTCGCCGCTGTGGGCTCGTAC GCCTACCTCACCGTCCAGGACTCCTTCGCGAGCCTGGCGTTCACGTACAGCACCGGAGTG ATCTTCCTCGGCTGCGTCACCATGGTGCTGCCGAAGATGCTCTCCAGAATCTTCCCTCCG CAGATACGCGGCCTGGGCATCGGGCTGCCGCACGCCTCGACCACCGCACTCCTCGGCGGG GCGGGGCCACTGCTGGCCGCCTACTCCGACGAGCGAGGCGCCTCGGGCTGGTTCATCGCC GCCGTGATGGCCGCGGTCCTGCTCGCCTGGCCGGCCACCCTGTGGGAGCGACGGCTGTTC CGCGCCCGGACGGCCCCGGGAAGCGAGCCGGTTCCCGAATCCGCCGTCGCCCGCCCCGTC GGGTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR005828 General substrate transporter (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP | No significant hit |
| TMHMM |  ![[22-44] Transmembrane (i-o)](../../img/C.gif "[22-44] Transmembrane (i-o)"){kind=small} ![[59-81] Transmembrane (o-i)](../../img/G.gif "[59-81] Transmembrane (o-i)"){kind=small} |
![[19-218] 7.29999999999999e-21 PF00083](../../img/H.gif "[19-218] 7.29999999999999e-21 PF00083"){kind=small}
![[9-426] 2.80000504261099e-58 SSF103473](../../img/B.gif "[9-426] 2.80000504261099e-58 SSF103473"){kind=small}
![[17-419] PS50850](../../img/M.gif "[17-419] PS50850"){kind=small}
