Calm_00060
Calm_00070 : CDS information
Location
| Organism | Micromonospora echinospora |
|---|---|
| Strain | NRRL 15839 |
| Entry name | Calicheamicin |
| Contig | AF497482 |
| Start / Stop / Direction | 7,595 / 6,006 / - [in whole cluster] 7,595 / 6,006 / - [in contig] |
| Location | complement(6006..7595) [in whole cluster] complement(6006..7595) [in contig] |
| Type | CDS |
| Length | 1,590 bp (529 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | CalT1 |
| Gene | |
| Gene (GenBank) | calT1 |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [CalT1] MTATMPAETPKVSAGRMSRREVLQALSGLMVGMFVSILASTVVANALPRIIADLDGSQTV YTWIVTTELLAMTATVPLWGKMADLYSKKLLIQLSLGLFAVGSLIAGLTPNVEVLLISRI VQGVGAGGMTALATIVMAAMIPPRELGRYAGIFGAVFGVGTIAGPLIGGVLVDTSWLGWR WCFLIGVPFTLLSIVLLQRTLHLPVTRRKVRIDWLGALLITSGVSTLLIWSSLAGNSFAW ASGWTALMVVGGLALLGLAVWVESRAEEPIVPLDIFRNRTVSLTTIASVLVGVAMFGGTV FLSQYFQIALGKSPTVAGLMSLPMIFGLLVSSTVAGQLITKYGRWKRFLVAGAVVMTVGM LLLSTIDADTGVPLLSVYMAVLGVGVGMLMQNLVLVAQNDVPAHELGAATSVLTFFRSMG GTIGVSALGAVLANRVATLSAEKLGPLAGGATAGGGHAVPDLSALPEPVLRIIQDVYGTA TAELFLIGAPFALLAVVVVLFIREKPLHTLSGEERRAREEAAAGMPGAH
>putative drug resistance transporter [CalT1] ATGACCGCCACCATGCCCGCCGAGACCCCCAAGGTCAGCGCCGGCCGCATGTCCCGCCGA GAGGTGCTCCAGGCACTCTCCGGCCTGATGGTCGGCATGTTCGTGTCGATCCTCGCCTCC ACGGTCGTGGCGAACGCGCTGCCGCGCATCATCGCCGACCTGGACGGCTCGCAGACCGTC TACACGTGGATCGTCACCACCGAGCTGCTGGCCATGACGGCGACCGTGCCGCTGTGGGGC AAGATGGCCGACCTCTACAGCAAGAAGCTGCTCATCCAGCTCTCCCTCGGGCTCTTCGCG GTCGGTTCGCTGATCGCCGGGCTGACCCCGAACGTCGAGGTGCTGCTGATCAGCCGCATC GTGCAGGGTGTCGGCGCGGGCGGCATGACCGCCCTGGCCACCATCGTGATGGCGGCGATG ATCCCGCCCCGCGAGCTGGGTCGCTACGCCGGCATCTTCGGCGCCGTGTTCGGCGTCGGC ACCATCGCCGGCCCGCTCATCGGCGGCGTACTGGTGGACACCTCCTGGCTCGGCTGGCGG TGGTGCTTCCTGATCGGGGTGCCGTTCACCCTGCTCTCGATCGTCCTGCTCCAGCGCACC CTGCACCTGCCGGTGACCCGCCGCAAGGTGCGCATCGACTGGCTCGGCGCGCTGCTCATC ACCTCGGGCGTCTCCACCCTGCTGATCTGGTCGTCGCTGGCCGGCAACTCCTTCGCCTGG GCGTCCGGCTGGACCGCCCTGATGGTCGTCGGCGGGCTCGCCCTGCTCGGGCTGGCGGTC TGGGTCGAGTCGCGCGCGGAGGAGCCGATCGTGCCGCTGGACATCTTCCGCAACCGGACG GTCTCGTTGACCACCATCGCCAGCGTGCTGGTCGGCGTGGCGATGTTCGGCGGCACCGTG TTCCTGTCCCAGTACTTCCAGATCGCGCTGGGCAAGTCGCCGACGGTGGCGGGGCTGATG AGCCTGCCGATGATCTTCGGCCTGCTGGTCTCGTCGACCGTCGCCGGTCAGCTGATCACG AAGTACGGCCGCTGGAAGCGGTTCCTGGTGGCCGGCGCCGTCGTGATGACCGTCGGCATG CTGCTGCTGAGCACCATCGACGCCGACACCGGCGTGCCGCTGCTCAGCGTCTACATGGCG GTGCTCGGCGTCGGCGTCGGCATGCTGATGCAGAACCTCGTGCTCGTGGCGCAGAACGAC GTGCCCGCGCACGAGCTGGGCGCGGCCACCTCCGTGCTGACCTTCTTCCGCAGCATGGGC GGGACGATCGGGGTGAGCGCGCTCGGCGCGGTGCTGGCCAACCGGGTCGCGACGCTGAGC GCGGAGAAGCTCGGCCCGTTGGCCGGCGGCGCCACCGCCGGGGGCGGGCACGCCGTGCCC GACCTGTCCGCGCTGCCCGAGCCGGTGCTGCGGATCATCCAGGACGTGTACGGGACCGCC ACCGCCGAGCTGTTCCTCATCGGCGCCCCGTTCGCGCTGCTCGCCGTGGTGGTCGTGCTG TTCATCCGGGAGAAGCCGCTGCACACCCTCAGCGGTGAGGAGCGGCGCGCCCGGGAGGAG GCGGCGGCCGGAATGCCCGGCGCGCACTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR001411 Tetracycline resistance protein TetB/drug resistance transporter (Family)
IPR006311 Twin-arginine translocation pathway, signal sequence (Conserved_site)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP | No significant hit |
| TMHMM |  ![[22-44] Transmembrane (i-o)](../../img/C.gif "[22-44] Transmembrane (i-o)"){kind=small} ![[59-81] Transmembrane (o-i)](../../img/G.gif "[59-81] Transmembrane (o-i)"){kind=small} |
![[28-52] 3.70000251046782e-10 PR01036](../../img/F.gif "[28-52] 3.70000251046782e-10 PR01036"){kind=small}
![[1-46] PS51318](../../img/M.gif "[1-46] PS51318"){kind=small}
![[29-424] 1.09999999999999e-46 PF07690](../../img/H.gif "[29-424] 1.09999999999999e-46 PF07690"){kind=small}
![[1-520] 2.1000026783403e-75 SSF103473](../../img/B.gif "[1-520] 2.1000026783403e-75 SSF103473"){kind=small}
