Calm_00220 : CDS information

Location

Organism	Micromonospora echinospora
Strain	NRRL 15839
Entry name	Calicheamicin
Contig	AF497482
Start / Stop / Direction	21,423 / 22,826 / + [in whole cluster] 21,423 / 22,826 / + [in contig]
Location	21423..22826 [in whole cluster] 21423..22826 [in contig]
Type	CDS
Length	1,404 bp (467 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	CalR3
Gene
Gene (GenBank)	calR3
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q8KNH5 PmId [12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002) comment calicheamicin生合成遺伝子クラスターの報告このORFは、Fig2の生合成clusterにて、putative regulatory elements(R1 to R9)と示されているのみ。本文中では特にふれていない。

Sequence

>hypothetical protein [CalR3]
MTRPADPSAERRTMVPSKFIFGLSPVGSAALRAAPPSRRPPLAPGGSGLGVRAVVIGSVA
TASLAAGLAAAAGTALRHGRPAGRRRFAREVARTVARLGPTFIKAAQVLGTRRDVVPALL
CDELSMLQDDVPPMDAAQSRAALREVYGDRLDTVFASVEETPVASGSIACVYRATLPDGA
TVAVKLRRPGIGPQMAADLGLLRRGASVVARLPMFRGVPVREVVDSLCESVLGQLDLGRE
GRDLDRLREDLGGVPRVRVPRVHAAASRPAAIVMDFIPDLAVDTGARCPRAMRRTFAAST
LTVVYQMLFINGFVHCDLHPGNLYFTRSGQVVVLDAGFSVQLSDKMRGLFADFFLNMSIG
RGDRCAAIVLESAIGVADDADVPAFTEGVKDLVARSYRLSAKEFSLIAFAGELFDLQRRY
GVAASPELVFPLLSLLVVEGTVRSLDPDIDFQETAKPVLNRALFGIR

>hypothetical protein [CalR3]
CTGACCCGGCCTGCTGACCCCTCGGCAGAAAGGCGCACGATGGTTCCGTCCAAGTTCATC
TTCGGCCTCTCCCCCGTCGGTTCGGCGGCCCTGCGCGCCGCCCCACCCTCCCGACGTCCA
CCGCTCGCACCCGGCGGGTCGGGGTTGGGCGTACGCGCGGTCGTCATCGGTTCGGTGGCG
ACCGCGTCGCTCGCGGCGGGGCTCGCCGCGGCCGCCGGTACGGCGCTCCGGCACGGCCGG
CCGGCCGGTCGCCGCCGCTTTGCCCGGGAGGTCGCGCGGACGGTCGCCCGGCTGGGCCCG
ACGTTCATCAAGGCCGCGCAGGTCCTGGGCACCCGCCGTGACGTCGTGCCGGCGCTGCTC
TGTGACGAGCTGTCCATGTTGCAGGACGACGTGCCGCCGATGGACGCCGCGCAGAGCCGG
GCCGCGCTGCGCGAGGTGTACGGGGACCGCCTGGACACGGTCTTCGCCTCGGTCGAGGAG
ACGCCGGTGGCCAGCGGCAGCATCGCCTGCGTCTACCGGGCGACGCTGCCCGACGGGGCC
ACCGTCGCGGTGAAGCTGCGCCGCCCCGGCATCGGTCCGCAGATGGCCGCCGATCTCGGC
CTGCTGCGCCGGGGCGCCTCGGTGGTCGCCCGACTGCCGATGTTCCGCGGTGTGCCGGTC
CGCGAGGTGGTGGACAGCCTCTGCGAGTCGGTGCTGGGCCAGCTCGACCTCGGCCGCGAG
GGACGCGACCTCGACCGGCTGCGGGAGGACCTGGGCGGGGTCCCGCGGGTACGCGTACCC
CGGGTGCACGCCGCGGCGAGCCGGCCGGCCGCCATCGTGATGGACTTCATCCCCGACCTG
GCCGTCGACACCGGCGCCCGGTGCCCCCGCGCGATGCGCCGGACGTTCGCGGCGTCGACC
CTGACCGTGGTCTACCAGATGCTGTTCATCAACGGCTTCGTCCACTGCGACCTGCATCCC
GGCAACCTCTACTTCACCCGCAGCGGGCAGGTGGTGGTGCTGGACGCGGGCTTCAGCGTC
CAACTGTCGGACAAGATGCGCGGGCTCTTCGCGGACTTCTTCCTCAACATGTCGATCGGG
CGTGGCGACCGCTGCGCCGCGATCGTGCTGGAGAGCGCCATCGGCGTCGCCGACGACGCG
GACGTGCCGGCCTTCACCGAGGGCGTGAAGGACCTGGTCGCCCGCAGCTACCGCCTGTCC
GCCAAGGAGTTCAGCCTGATCGCCTTCGCCGGCGAGCTGTTCGACCTGCAACGCCGGTAC
GGGGTGGCCGCGTCGCCGGAGCTGGTCTTCCCGCTACTGTCGCTGCTCGTCGTGGAGGGC
ACGGTGCGGTCGCTCGACCCGGACATCGACTTCCAGGAGACCGCGAAGCCGGTGCTCAAC
CGGGCGCTGTTCGGCATCCGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR004147 UbiB domain (Domain) PF03109 ABC1 IPR011009 Protein kinase-like domain (Domain) SSF56112 Kinase_like
SignalP	No significant hit
TMHMM	No significant hit

Calm_00210 Calm_00230