Calm_00230 : CDS information

Location

Organism	Micromonospora echinospora
Strain	NRRL 15839
Entry name	Calicheamicin
Contig	AF497482
Start / Stop / Direction	24,506 / 22,968 / - [in whole cluster] 24,506 / 22,968 / - [in contig]
Location	complement(22968..24506) [in whole cluster] complement(22968..24506) [in contig]
Type	CDS
Length	1,539 bp (512 aa)

Annotation

Category	4.3 transport
Product	putative transporter
Product (GenBank)	CalT2
Gene
Gene (GenBank)	calT2
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q8KNH4 PmId [12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002) comment calicheamicin生合成遺伝子クラスターの報告このORFは、Fig2の生合成clusterにて、membrane transport(T1 to T7)と示されているのみ。本文中では特にふれていない。
Family/Domain	FD IPR000914 comment [IPR000914] Bacterial extracellular solute-binding protein, family 5 (Domain)

Sequence

>putative transporter [CalT2]
MTGVREQERVTDTHTGTDTLRFLGPVDGGLPDEPAPGCIGTGQILRLLTRQLFAYPTGTD
PGVRPAADAAVEVPTVGNGGISADGRTWRIRLRDGIRWDAQAARALTAGDVVRGIKRTAH
PLARAMRPYLGEIIEGMADYYQAYDEALGHWEAHAPAFAQFQQFTRIPGLRAEGDTVVLR
LTAPANDLVDLLATGFTAAAPREYDYYVPESPELYRCTPSAGPYRIAKRLSPGGDLVLEP
NPRWDPGTDPVRRRTARHIEVVAAADGQPVDPAAGFGVLSWSVPSPAARFAGTGCSYYLA
AGAGGAAEPHAVRHALSWALDRAALAESACAAGADGAATQHGVLQPGHPAAERGADDAPD
AGDPERARRLLDDAGLGEGTRLTLGVPAGSRLGAVAAALVAVLARYGITLVPVPLAPAGG
PGVDVVLHEWVPGWAGDAGRDLVHRMWPSDGRAGDPAEVAREALRATDPGEAATLWRRFD
RLATADLRLVPLLVADWPRTRADGVAAGAARW

>putative transporter [CalT2]
ATGACCGGCGTACGCGAGCAGGAACGCGTCACCGACACGCACACCGGGACGGACACTCTC
CGTTTCCTGGGCCCCGTCGACGGCGGGCTGCCCGACGAGCCGGCCCCGGGCTGCATCGGG
ACCGGGCAGATCCTCCGGCTGCTCACCCGGCAGTTGTTCGCGTACCCCACCGGCACGGAC
CCGGGCGTCCGACCGGCGGCGGACGCGGCCGTGGAAGTGCCCACGGTCGGCAACGGAGGG
ATCAGCGCGGACGGGCGCACCTGGCGCATCCGGCTCCGGGACGGCATCCGCTGGGACGCC
CAGGCGGCCCGGGCGCTGACCGCCGGCGACGTCGTCCGGGGCATCAAGCGCACCGCCCAC
CCCCTCGCCCGCGCGATGCGTCCGTACCTCGGCGAGATCATCGAGGGCATGGCGGACTAC
TACCAGGCGTACGACGAGGCGCTCGGGCACTGGGAGGCGCACGCCCCCGCCTTCGCCCAG
TTCCAGCAGTTCACCCGGATCCCGGGGCTGCGCGCCGAGGGGGACACCGTCGTCCTGCGG
CTCACCGCGCCGGCCAACGACCTCGTCGACCTGCTCGCCACGGGATTCACCGCGGCGGCC
CCCCGCGAGTACGACTACTACGTGCCCGAGAGCCCCGAGCTGTACCGGTGCACGCCCTCC
GCCGGGCCGTACCGCATCGCCAAGCGGCTGTCCCCGGGCGGCGACCTCGTCCTGGAGCCC
AACCCCCGGTGGGATCCGGGCACCGACCCGGTACGCCGGCGCACCGCGCGGCACATCGAG
GTCGTCGCGGCGGCGGACGGCCAGCCGGTCGACCCCGCGGCGGGCTTCGGGGTGCTGTCC
TGGTCGGTGCCGTCGCCGGCGGCCCGGTTCGCCGGCACGGGGTGCAGCTACTACCTCGCC
GCGGGCGCCGGCGGGGCGGCCGAGCCCCACGCCGTACGGCATGCGCTGTCCTGGGCGCTC
GACCGTGCGGCCCTCGCCGAGTCGGCCTGCGCGGCCGGTGCCGACGGCGCCGCCACCCAG
CACGGCGTCCTGCAACCCGGGCACCCGGCGGCGGAACGCGGCGCGGACGACGCACCCGAC
GCCGGCGACCCGGAGCGGGCGAGGCGCCTGCTCGACGACGCCGGGCTGGGGGAGGGCACC
CGACTGACCCTGGGCGTCCCCGCCGGCTCGCGGCTGGGCGCCGTGGCCGCCGCCCTGGTG
GCGGTGCTGGCGCGGTACGGGATCACCCTCGTGCCGGTCCCGCTGGCCCCCGCCGGCGGG
CCGGGCGTCGACGTCGTGCTGCACGAGTGGGTGCCCGGCTGGGCCGGCGACGCCGGCCGC
GACCTGGTGCACCGGATGTGGCCGTCCGACGGCCGCGCCGGTGACCCCGCCGAGGTGGCG
CGGGAGGCGCTGCGGGCCACGGACCCGGGTGAGGCGGCGACGCTGTGGCGTCGCTTCGAC
AGGTTGGCCACCGCCGACCTGCGGCTCGTGCCCCTGCTCGTGGCGGACTGGCCGCGGACC
CGGGCCGACGGCGTGGCCGCCGGGGCGGCCCGGTGGTAG

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR000914 Bacterial extracellular solute-binding protein, family 5 (Domain) PF00496 SBP_bac_5
SignalP	No significant hit
TMHMM	No significant hit

Calm_00220 Calm_00240