Calm_00320 Calm_00320   Calm_00340 Calm_00340

Calm_00330 : CDS information

close this sectionLocation

Organism
StrainNRRL 15839
Entry nameCalicheamicin
Contig
Start / Stop / Direction37,111 / 36,452 / - [in whole cluster]
37,111 / 36,452 / - [in contig]
Locationcomplement(36452..37111) [in whole cluster]
complement(36452..37111) [in contig]
TypeCDS
Length660 bp (219 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)CalU13
Gene
Gene (GenBank)calU13
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002)
comment
calicheamicin生合成遺伝子クラスターの報告

このORFは、Fig2の生合成clusterにて、unknown function(U1 to U22)と示されているのみ。本文中では特にふれていない。

close this sectionSequence

selected fasta
>hypothetical protein [CalU13]
MAIREIDTTLPVVRSLPAPGRYLCGLTFDGEFFWHSDQEAGEIYALAPDTGAVVRTLSCP
RARADLTVGGGALCQVGGRPKRILLIDPLTGEALGEKEVAPPSGRLCGVETTGVAMWMGL
RGPSVVQLRDVATMTVQREFPVPGVPSGLTVAGDLVVYADFEGAMLRAVDARHGTLRGQA
PVAGRPVGLTWDGALLWYADFAGRRLAAVRLPDLLAAGS
selected fasta
>hypothetical protein [CalU13]
ATGGCCATCCGCGAGATCGACACGACGTTGCCGGTCGTCCGGTCGCTGCCCGCGCCGGGT
CGCTACCTGTGCGGCCTCACCTTCGACGGCGAGTTCTTCTGGCACTCCGACCAGGAGGCC
GGCGAGATCTACGCCCTCGCCCCGGACACCGGCGCCGTCGTGCGGACCCTGTCCTGCCCC
CGGGCGCGGGCCGACCTCACGGTGGGCGGCGGCGCGCTCTGCCAGGTCGGCGGACGCCCG
AAGCGGATCCTGCTGATCGACCCGCTCACCGGCGAGGCGCTCGGCGAGAAGGAGGTGGCT
CCGCCCAGCGGCCGGCTCTGCGGTGTGGAGACCACCGGCGTGGCGATGTGGATGGGGCTG
CGCGGGCCGTCGGTCGTCCAGCTCCGCGACGTCGCCACGATGACCGTCCAGCGTGAGTTC
CCGGTGCCCGGCGTGCCGTCCGGGCTGACGGTGGCCGGTGACCTCGTGGTCTACGCGGAC
TTCGAGGGGGCGATGCTGCGGGCGGTCGACGCCCGGCACGGCACGCTGCGCGGACAGGCG
CCCGTGGCCGGCCGCCCGGTCGGCCTGACCTGGGACGGCGCCCTGCTCTGGTACGCCGAC
TTCGCCGGCCGCCGGCTGGCGGCGGTGCGGCTGCCCGATCTGCTCGCCGCCGGGTCGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR011044 Quinoprotein amine dehydrogenase, beta chain-like (Domain)
[3-212] 3.00000067992871e-17 SSF50969
SSF50969   Amine_DH_B_like
IPR015943 WD40/YVTN repeat-like-containing domain (Domain)
[34-211] 4.2e-15 G3DSA:2.130.10.10
G3DSA:2.130.10.10   WD40/YVTN_repeat-like
SignalP No significant hit
TMHMM No significant hit
Calm_00320 Calm_00320   Calm_00340 Calm_00340
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