Calm_00550 : CDS information

Location

Organism	Micromonospora echinospora
Strain	NRRL 15839
Entry name	Calicheamicin
Contig	AF497482
Start / Stop / Direction	64,779 / 66,461 / + [in whole cluster] 64,779 / 66,461 / + [in contig]
Location	64779..66461 [in whole cluster] 64779..66461 [in contig]
Type	CDS
Length	1,683 bp (560 aa)

Annotation

Category	4.3 transport
Product	putative transporter
Product (GenBank)	CalT7
Gene
Gene (GenBank)	calT7
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q8KNE2 PmId [12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002) comment calicheamicin生合成遺伝子クラスターの報告このORFは、Fig2の生合成clusterにて、membrane transport(T1 to T7)と示されているのみ。本文中では特にふれていない。
Family/Domain	FD IPR000914 comment [IPR000914] Bacterial extracellular solute-binding protein, family 5 (Domain)

Sequence

>putative transporter [CalT7]
MTQARSATTTNDTRLRGTLRLLGPAAVHQADPAAAWSPAERQLLRLCTRQLISYRPEPDP
GDWRALAPVADLATDVPSTYNAGLGASHRSYVVHLRPGVLWDTPTPRPVTAHDVVRGFKR
LANPLTRHPALAYFRGTLRGMGRYCDEYAAAVAGHPVTAALLAGFQDAHEIPGVFAVDDE
TVVFELDRPALDFVDMLAQSGASPAPVEYDAHLPGSAGLHEHLVANGPYRVVSWRPGGTI
RLEPNPAWRAETDPIRERRFDAVEFRVAMGGPRELADRLAADDADLPWGVPIGPVPGQRL
DPCLVFNLRDPANPAVADAAVRRVVAGAVDRAALVRIARAADPWSEVRAAHTVVPPGNDG
HRQPDPLTDPIPDADADPRERLAAAGHPDGLTLTAVHPDTAEDLALARSWAADLGAAGID
VRLVALDDANHRALLAATGDAPGLRWDLATATFTAPWAYGNARVFLQPLVGEGPGNPGGY
RDPGVDRVVERALDAADPREAVALWQEVERRLLADAAVVPLLFRRATDAAPRGPRVRRAT
ALPALAGLPDLADVRLGVDR

>putative transporter [CalT7]
GTGACGCAGGCGCGCAGTGCAACGACGACGAACGACACCCGGCTGCGGGGCACCCTGCGG
CTGCTCGGGCCCGCCGCCGTCCACCAGGCGGACCCGGCCGCCGCCTGGTCGCCGGCCGAG
CGCCAGTTGCTGCGGCTGTGCACCCGGCAGCTGATCAGCTACCGCCCGGAACCCGACCCG
GGCGACTGGCGCGCCCTCGCGCCGGTCGCCGACCTGGCCACCGACGTCCCCTCGACCTAC
AACGCCGGCCTGGGCGCCAGCCACCGCAGCTACGTGGTGCACCTGCGCCCCGGGGTGCTC
TGGGACACGCCGACCCCCCGCCCGGTGACGGCGCACGACGTCGTACGCGGCTTCAAGCGG
CTGGCCAACCCGCTCACCCGACACCCCGCGCTGGCGTACTTCCGGGGCACCCTGCGGGGC
ATGGGCCGGTACTGCGACGAGTACGCGGCGGCGGTCGCCGGCCACCCGGTCACCGCGGCG
CTGCTCGCCGGCTTCCAGGACGCCCACGAGATCCCCGGCGTGTTCGCCGTCGACGACGAG
ACGGTGGTCTTCGAGCTGGACCGTCCGGCGCTGGACTTCGTCGACATGCTGGCGCAGAGC
GGCGCCTCCCCGGCCCCGGTGGAGTACGACGCACACCTGCCGGGAAGCGCCGGCCTGCAC
GAGCACCTGGTCGCCAACGGCCCGTACCGCGTCGTGTCGTGGCGCCCCGGGGGCACCATC
CGGCTGGAGCCGAACCCGGCGTGGCGGGCGGAGACCGACCCGATCCGCGAGCGGCGGTTC
GACGCCGTCGAGTTCCGCGTCGCCATGGGCGGGCCGCGCGAACTGGCCGACCGGCTCGCC
GCCGACGACGCCGACCTGCCGTGGGGCGTGCCGATCGGCCCGGTGCCCGGTCAGCGGCTC
GACCCGTGCCTGGTGTTCAACCTGCGCGACCCCGCCAACCCGGCCGTCGCCGACGCCGCG
GTGCGCCGGGTCGTCGCCGGGGCGGTCGACCGGGCGGCGCTGGTGCGCATCGCCCGGGCC
GCCGACCCGTGGTCCGAGGTCCGCGCCGCGCACACCGTCGTGCCGCCCGGCAACGACGGG
CACCGGCAGCCCGACCCGCTCACCGACCCGATTCCCGACGCCGACGCGGACCCGCGCGAG
CGGCTCGCCGCCGCGGGGCACCCGGACGGGCTCACCCTGACCGCGGTGCACCCCGACACG
GCCGAGGACCTGGCGCTGGCCCGCTCGTGGGCGGCCGACCTCGGCGCCGCCGGCATCGAC
GTACGCCTGGTCGCGCTCGACGACGCCAACCACCGGGCCCTGCTCGCCGCCACGGGCGAC
GCGCCCGGCCTGCGATGGGACCTGGCGACCGCCACGTTCACCGCGCCGTGGGCCTACGGC
AACGCCCGGGTGTTCCTGCAACCGCTGGTCGGCGAGGGACCCGGCAACCCCGGCGGCTAC
CGCGACCCCGGGGTTGACCGGGTGGTCGAGCGCGCGCTGGACGCGGCCGACCCGCGCGAG
GCGGTCGCCCTGTGGCAGGAGGTGGAGCGGCGGCTGCTCGCCGACGCCGCGGTCGTACCC
CTGCTGTTCCGGCGGGCCACGGACGCCGCGCCGCGCGGGCCCCGGGTGCGGCGCGCGACC
GCCCTGCCGGCGCTCGCCGGCCTGCCCGACCTCGCCGACGTGCGGCTCGGGGTGGACCGG
TGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR000914 Bacterial extracellular solute-binding protein, family 5 (Domain) PF00496 SBP_bac_5
SignalP	No significant hit
TMHMM	No significant hit

Calm_00540 Calm_00560