Dynm_00005 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	14 / 2,110 / + [in whole cluster] 14 / 2,110 / + [in contig]
Location	14..2110 [in whole cluster] 14..2110 [in contig]
Type	CDS
Length	2,097 bp (698 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference	PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 orf1 (partial) Unknown protein このorfは、Genbankにて1-2110 nuq(misc_feature)で登録されている。uniprot entryなし。機能解析はされていない。

Sequence

>hypothetical protein
MLWRAQIASRGFLAADDYVMITQASESDLTGGYLLSLYNNHFMPAGRLIIWLVTSAFGLT
YWPYVLLMAVGQAVLSVAFYRLLRTLLRPSRLLLVPLGLLLFSPLTLEATSWWAVGANML
PMQLAMVLALGSQLKYVRTGRKRHLVSLVLSVLLGLLFFEKALLVVPLVFLFTACFLTDG
GPVRAALTTLRRWWPSWLALTTLVAAFFGVYLLRSESSLRRPESIGEVVSFLSQLIGSTL
VPGLLGGPWGWLGAGDGAPVVAPPELGRWIAWTFMAALVVFTVRRDRTAGRSWALLSGYL
VLVAVLLASTRLGSVYSGVAGGVPRYVSDVVVVAAICIGVALVGIARPVPAGSAPAAPAE
PAPPTDPVSAVEPEPARQPEPVAPRRPVAALSSRVGVIHAETPYDPEIEPAGQLEPEPTP
EPGPASLGPEPAPETTSEAGSTSAVDDGSVARPAPGPDTAEPGPREPAPPPPDWLAGVPE
RYREVVTAGLVLVLLAAMLGTAWTTSRYSDEWALKFGRSYLDTARIELASAPPDTVFFDT
PIPPAVIPELSWPYNLQSRFFAAAGARPVFVHETENASVLDGLGRVQVATIEGSSIRPGP
QEGCGYLVGDGQTVRMPLDKPRDDWFWIVRIGYLSSSDGTAVLRLGQGSHEFPVKKGLNQ
RFFEISGGGDAVELTVSGPAISLCTNEISIGNPIPKPE

>hypothetical protein
GTGCTCTGGCGGGCGCAGATCGCCTCCCGCGGTTTCCTGGCGGCCGACGACTACGTGATG
ATCACGCAGGCGTCCGAGTCCGACCTCACCGGCGGCTACCTGCTCAGCCTGTACAACAAC
CACTTCATGCCGGCCGGGCGGCTGATCATCTGGCTGGTCACCAGCGCCTTCGGCCTCACC
TACTGGCCGTACGTGCTGCTGATGGCGGTCGGCCAGGCGGTGCTCAGCGTGGCCTTCTAC
CGGTTGCTGCGTACATTGCTGCGGCCGAGCCGGCTGCTGCTGGTTCCGCTCGGGCTGTTG
CTGTTCAGCCCGCTGACCCTGGAGGCAACGTCCTGGTGGGCGGTCGGCGCGAACATGCTG
CCGATGCAGCTGGCCATGGTGCTCGCCCTCGGATCGCAGCTGAAGTACGTGCGCACCGGG
CGGAAGCGGCATCTGGTGTCGCTGGTCCTCTCCGTGCTGCTCGGCCTGCTCTTCTTCGAG
AAGGCGCTGCTTGTCGTGCCGCTGGTCTTTCTCTTCACCGCGTGCTTCCTCACCGACGGC
GGCCCGGTACGCGCGGCGCTGACCACGCTGCGCCGGTGGTGGCCGTCCTGGCTGGCACTC
ACCACCCTCGTGGCCGCCTTTTTCGGGGTCTATCTGCTCCGGTCGGAGTCGTCCCTGCGC
CGACCGGAGTCCATCGGCGAGGTCGTCTCGTTCCTGTCCCAGCTGATCGGCTCCACCCTC
GTGCCGGGGCTGCTCGGCGGCCCGTGGGGCTGGCTGGGAGCTGGTGACGGCGCGCCGGTG
GTGGCCCCGCCGGAACTCGGCCGGTGGATCGCCTGGACGTTCATGGCCGCTCTGGTGGTG
TTCACCGTGCGGCGGGACCGCACGGCCGGCCGGTCCTGGGCTCTGCTGAGCGGGTACCTG
GTCCTGGTCGCCGTGCTGCTGGCGTCGACCCGGTTGGGCTCGGTCTACAGCGGGGTGGCC
GGCGGCGTGCCCCGGTACGTCAGCGACGTTGTGGTGGTAGCGGCGATCTGCATCGGCGTC
GCGCTGGTCGGCATCGCCCGACCGGTACCGGCCGGGTCCGCGCCGGCCGCGCCCGCCGAA
CCGGCTCCGCCGACGGATCCGGTGTCGGCCGTCGAGCCGGAGCCGGCACGGCAGCCGGAA
CCGGTCGCCCCGCGCCGACCGGTTGCCGCCTTGTCCTCCCGGGTCGGCGTCATCCATGCC
GAGACGCCGTACGACCCGGAGATCGAACCGGCCGGGCAGCTTGAACCCGAGCCGACCCCC
GAGCCGGGGCCGGCGTCCCTGGGGCCGGAGCCGGCACCCGAGACCACCAGCGAGGCCGGC
AGCACCTCGGCGGTCGACGACGGATCGGTCGCCCGGCCCGCGCCGGGTCCCGACACCGCA
GAACCGGGGCCGCGGGAGCCGGCTCCCCCGCCGCCCGACTGGCTGGCCGGAGTACCCGAG
CGGTACCGGGAGGTGGTCACCGCGGGTCTGGTGCTGGTCCTGCTGGCCGCGATGTTGGGC
ACCGCCTGGACCACGTCCCGCTACAGCGACGAGTGGGCGCTCAAGTTCGGCCGGTCCTAC
CTGGACACGGCCCGGATCGAGCTGGCCAGCGCCCCACCCGACACCGTCTTCTTCGACACC
CCGATCCCGCCGGCCGTGATCCCGGAGCTCTCCTGGCCGTACAACCTCCAGTCCCGCTTC
TTCGCGGCGGCCGGCGCCCGGCCGGTGTTCGTGCACGAGACGGAGAACGCCTCCGTGCTG
GACGGCCTCGGCCGCGTGCAGGTGGCCACCATCGAAGGCAGCAGCATCCGGCCGGGCCCG
CAGGAGGGCTGCGGCTACCTGGTCGGCGACGGGCAGACCGTCCGGATGCCGCTGGACAAG
CCACGCGACGACTGGTTCTGGATCGTCCGGATCGGCTACCTGAGTTCCAGCGACGGCACC
GCTGTGCTGCGGCTCGGCCAGGGCAGCCACGAGTTCCCGGTCAAGAAGGGGCTGAACCAG
CGATTCTTCGAGATCAGCGGGGGCGGGGACGCCGTCGAGCTGACCGTGAGCGGCCCGGCC
ATCAGCCTCTGCACGAACGAGATCTCGATCGGCAACCCGATCCCGAAGCCGGAGTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	No significant hit
SignalP	No significant hit
TMHMM	Transmembrane 9

first Dynm_00010