Dynm_00030 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	4,478 / 6,295 / + [in whole cluster] 4,478 / 6,295 / + [in contig]
Location	4478..6295 [in whole cluster] 4478..6295 [in contig]
Type	CDS
Length	1,818 bp (605 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF4
Reference	ACC B2BM18 PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 orf4 Putative resistance protein 機能解析はされていない。

Sequence

>hypothetical protein [hypothetical protein]
MTLYGEKVPSADDRPTVKVTAVSWPDVEMEPVAAPDAGGTGKSGRSRRGRLLLAGGIVAA
VLAAGTGLGTYAYAGDVPRGTTVLGAELGGRSRAEAARALRAELERREAALNAPVTVTVG
QKTAELKPADIGLAVDVDATVAAAAAAEAHPVSRLVGSRTVDPVVTVDTARLESVLRKAM
GDQGREMTMPAIIYTGTTPKPVYPKPALTVDAPGAAHAVKAGWLAGAPVAVPLVEKWPAS
TREEVDRLVAELARPAVAAPVTLTTDGGSVTIPPAAIARGLRFSADDTGKLTPRVDVKRL
RTALGDQLAKLEVAPKDAGLTISGGKPKVVPSRAGRQVDAAALGRDLLAVLPKADGRTVT
AALKPAEPELTEAKLAELGIKERVSTFTTRFPGGLSSPRSQNIVQAAKDVDGTIVRPGET
FSLNGHTGERGYDQGYKDAPTIVNGKLVPGVGGGVSQFTTTLFNASYYAGLEDVEHKPHS
FYFSRYPAVIESTIYWPQLDFKFRNNTPYGVLIDTSYTSSTITVSMWSTKIYDSVKTEYG
PRRDITQPKTVYLDPGPDCIAAAGSVGFAQDAYRVIKKDGKVVKREKFSWRYDPEPRFIC
AKPPA

>hypothetical protein [hypothetical protein]
GTGACGCTCTACGGCGAAAAAGTGCCTTCCGCCGACGACCGGCCCACCGTGAAGGTGACA
GCGGTGAGCTGGCCGGACGTCGAGATGGAACCGGTCGCCGCCCCCGACGCCGGCGGGACC
GGGAAGTCGGGGCGGTCCCGGCGCGGGCGGCTGCTGCTCGCCGGCGGGATCGTCGCCGCG
GTGCTGGCCGCCGGCACCGGTCTCGGCACCTACGCGTACGCCGGCGACGTGCCCCGGGGC
ACCACGGTCCTCGGCGCCGAGCTGGGCGGGCGGAGCCGGGCCGAGGCGGCCCGGGCGCTC
CGTGCCGAGCTGGAGCGCCGGGAGGCGGCGCTGAACGCCCCGGTCACCGTCACGGTGGGC
CAGAAGACCGCCGAGCTGAAGCCGGCCGACATCGGGCTCGCCGTCGACGTGGACGCCACC
GTGGCGGCGGCCGCCGCCGCCGAGGCACACCCGGTGAGCCGCCTCGTCGGCTCCCGCACT
GTCGATCCGGTGGTCACCGTCGACACCGCCCGGCTGGAGTCGGTGCTGCGCAAGGCCATG
GGTGACCAGGGCCGCGAGATGACCATGCCGGCCATCATCTACACCGGCACCACCCCCAAG
CCGGTCTACCCGAAGCCGGCGCTGACCGTCGACGCGCCCGGCGCCGCCCACGCGGTGAAG
GCCGGCTGGCTGGCCGGCGCGCCGGTGGCCGTGCCGCTTGTCGAGAAGTGGCCGGCGAGC
ACCCGCGAGGAGGTCGACCGGCTCGTCGCGGAGCTGGCCCGGCCGGCCGTCGCGGCCCCG
GTCACGCTCACCACCGACGGCGGCTCGGTCACCATCCCGCCCGCCGCCATCGCCCGGGGG
CTGCGCTTCTCGGCCGACGACACCGGCAAGCTGACTCCCCGCGTCGACGTCAAGCGGCTG
CGGACCGCCCTCGGCGACCAGCTCGCGAAGCTCGAGGTCGCGCCGAAGGACGCCGGGCTG
ACCATCAGCGGCGGCAAGCCGAAGGTGGTGCCGAGCCGGGCCGGCCGGCAGGTCGACGCC
GCGGCGCTCGGCCGGGACCTGCTCGCCGTCCTGCCGAAGGCGGACGGCCGCACGGTGACC
GCCGCGCTGAAGCCGGCGGAGCCGGAGCTGACCGAGGCGAAGCTCGCCGAGCTGGGCATC
AAGGAGCGGGTCTCCACCTTCACCACCCGGTTCCCCGGCGGCCTGTCCTCGCCGCGCAGC
CAGAACATCGTCCAGGCCGCCAAGGACGTGGACGGCACCATCGTGCGGCCGGGAGAGACC
TTCTCGCTCAACGGCCACACCGGCGAGCGCGGCTACGACCAGGGCTACAAGGACGCGCCG
ACGATCGTGAACGGCAAGCTGGTGCCGGGCGTGGGCGGTGGCGTCTCGCAGTTCACCACC
ACGCTCTTCAACGCCAGCTATTACGCGGGCCTGGAGGACGTCGAGCACAAGCCGCACTCG
TTCTACTTCAGCCGCTATCCCGCGGTCATCGAGTCGACCATCTACTGGCCGCAACTGGAC
TTCAAGTTCCGCAACAACACCCCGTACGGCGTCCTGATCGACACCTCCTACACGTCGAGC
ACGATCACCGTGTCGATGTGGAGCACCAAGATCTACGACAGCGTCAAGACCGAGTACGGC
CCGCGCCGGGACATCACCCAGCCCAAGACGGTCTACCTGGATCCCGGCCCGGACTGCATC
GCCGCCGCGGGCAGCGTCGGCTTCGCCCAGGACGCCTACCGGGTCATCAAGAAGGACGGC
AAGGTGGTGAAGCGGGAGAAGTTCAGCTGGCGCTACGACCCCGAGCCGCGCTTCATCTGC
GCCAAGCCGCCCGCCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR007391 Vancomycin resistance VanW (Family) PF04294 VanW IPR022029 Putative peptidoglycan binding domain (Domain) PF12229 PG_binding_4
SignalP	No significant hit
TMHMM	Transmembrane 1

Dynm_00020 Dynm_00040