Dynm_00030 Dynm_00030   Dynm_00050 Dynm_00050

Dynm_00040 : CDS information

close this sectionLocation

Organism
StrainATCC 53710 (=NBRC 15963)
Entry nameDynemicin
Contig
Start / Stop / Direction7,016 / 6,369 / - [in whole cluster]
7,016 / 6,369 / - [in contig]
Locationcomplement(6369..7016) [in whole cluster]
complement(6369..7016) [in contig]
TypeCDS
Length648 bp (215 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.1 general function
Productputative oxidoreductase
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF5
Reference
ACC
PmId
[18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008)
comment
Dynemicin生合成遺伝子クラスターの報告。

orf5 NADP oxidoreductase, F420-dependent

機能解析はされていない。
Family/Domain
FD
IPR004455
comment
[IPR004455] NADP oxidoreductase, coenzyme F420-dependent (Family)

close this sectionSequence

selected fasta
>putative oxidoreductase [hypothetical protein]
MAEAGEVMKIGIIGSGHIGGTLTRRLRTLGHDVTVANSRGPQSLTDLATETGATAGTLEE
AVQDAELVVIAVPVKAVPDLPAALFDGKLVVDADNYYPQRDGDIPELLDRSLSSSRWTAD
HLKGARVVKVFNNIQAAHLMDAGKPAGTPGRIALPVAGDDADAKRVVMQLVDDLGFDPVD
GGTLDESWRQQPDTPVYGTDRDADGVRQGLAEARP
selected fasta
>putative oxidoreductase [hypothetical protein]
TTGGCGGAGGCAGGAGAGGTCATGAAGATCGGAATCATCGGGTCGGGGCACATCGGCGGC
ACCCTCACCCGTCGACTGCGCACGCTGGGCCACGACGTCACGGTGGCCAACTCGCGGGGG
CCGCAGAGCCTGACCGACCTGGCCACGGAGACCGGCGCGACGGCCGGCACCCTGGAGGAG
GCCGTCCAGGACGCGGAGCTCGTCGTCATCGCCGTCCCGGTCAAGGCGGTGCCGGACCTG
CCGGCGGCGCTCTTCGACGGCAAGCTGGTCGTCGACGCCGACAACTACTACCCCCAGCGG
GACGGCGACATCCCCGAGCTGCTCGACCGCAGCCTCAGCTCCAGCCGCTGGACGGCGGAC
CACCTCAAGGGCGCCCGCGTCGTGAAGGTCTTCAACAACATCCAGGCCGCGCACCTCATG
GACGCCGGCAAACCGGCGGGCACCCCGGGCCGCATCGCGCTGCCGGTGGCCGGGGACGAC
GCCGACGCGAAGCGGGTCGTCATGCAGCTGGTGGACGACCTCGGCTTCGACCCGGTGGAC
GGCGGCACGCTCGACGAGAGCTGGCGGCAGCAGCCGGACACCCCGGTCTACGGCACCGAC
CGCGACGCGGACGGCGTACGGCAGGGGCTGGCCGAGGCGCGACCCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR004455 NADP oxidoreductase, coenzyme F420-dependent (Family)
[9-95] 1.6e-20 PF03807
PF03807   F420_oxidored
IPR016040 NAD(P)-binding domain (Domain)
[8-210] 8.1e-69 G3DSA:3.40.50.720
G3DSA:3.40.50.720   NAD(P)-bd
SignalP No significant hit
TMHMM No significant hit
Dynm_00030 Dynm_00030   Dynm_00050 Dynm_00050
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