Dynm_00100 : CDS information
Location
Organism | Micromonospora chersina |
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Strain | ATCC 53710 (=NBRC 15963) |
Entry name | Dynemicin |
Contig | EF552206 |
Start / Stop / Direction | 16,939 / 18,657 / + [in whole cluster] 16,939 / 18,657 / + [in contig] |
Location | 16939..18657 [in whole cluster] 16939..18657 [in contig] |
Type | CDS |
Length | 1,719 bp (572 aa) |
Annotation
Category | 5.1 general function |
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Product | putative arginine--tRNA ligase putative arginyl-tRNA synthetase |
Product (GenBank) | putative class Ic arginyl-tRNA synthetase |
Gene | orf11 argS |
Gene (GenBank) | |
EC number | 6.1.1.19 |
Keyword | |
Note | |
Note (GenBank) |
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Reference |
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Related Reference | |
Family/Domain |
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Sequence
>putative arginine--tRNA ligase [putative class Ic arginyl-tRNA synthetase] MDLEKLLTDRLAPAFATVAGGPVDPVVRRSQRADFQSDAALALARRLGRPPRAIATEVLE RAELADLCSATEVSGPGFLNLTVADDALAGLVSALAADPRLGVPEAAAPETVVVDYSAPN VAKEMHVGHLRSTVIGDAAARLLEWLGHRVLRANHLGDWGTPFGMLIEHLVDLGEAEAAQ ELSMGDLDSFYKAARAKFDADEAFRERARQRVVALQGGDATTLRLWRLLVEQSERYFLTV YDLLDVTLTERDFHGESSYNDLLGPVVEDLDRLGLLRSSDGAACVFPPGSVGRDGEPLPL IVRKSDGGYGYPATDLAAIRHRTGTLGATRLLYVVGLPQRRHFEMVYAAAAQAGWLAPPA RAEHVGFGSILGPDGRMLRSRASGSVKLVGLLEEAVARATALARERNPELGEAEAAEVGR AVGIGAVKYADLSSDRHKDYVLDWERMLSLDGNSAPYLQYAHSRIRSIFRRAGVAARPEA PVSLVDPAERALAFELVGFGAVVGAVAENLEFHHLTACLSRLAAAFSAFYERCPVLRADE PVRESRLVLCDLTARVLRQGLHLLGIRTPERL
>putative arginine--tRNA ligase [putative class Ic arginyl-tRNA synthetase] ATGGATCTGGAGAAACTGCTGACCGACCGGCTGGCGCCGGCGTTCGCCACGGTGGCCGGC GGGCCGGTGGACCCGGTCGTGCGGCGCTCCCAGCGCGCGGACTTCCAGTCGGACGCGGCG CTGGCGCTGGCGCGGCGGCTCGGCCGGCCGCCGCGCGCCATCGCCACCGAGGTGCTGGAG CGCGCGGAACTGGCCGACCTGTGCAGCGCCACGGAGGTCTCCGGGCCGGGTTTCCTCAAC CTGACCGTGGCCGACGACGCCCTGGCCGGGCTGGTCTCCGCGCTGGCCGCCGACCCGCGG CTCGGGGTGCCGGAGGCCGCCGCGCCGGAGACCGTGGTGGTCGACTACTCCGCGCCGAAC GTGGCGAAGGAGATGCACGTCGGGCACCTGCGCTCGACGGTGATCGGCGACGCGGCGGCC CGGCTGCTGGAGTGGCTGGGGCACCGGGTGCTGCGCGCCAACCACCTGGGCGACTGGGGC ACGCCCTTCGGCATGCTGATCGAGCACCTGGTCGACCTGGGCGAGGCCGAGGCGGCGCAG GAGCTGTCGATGGGCGACCTGGACTCGTTCTACAAGGCGGCCCGGGCCAAGTTCGACGCC GACGAGGCGTTCCGCGAGCGGGCCCGGCAGCGGGTGGTGGCGTTGCAGGGCGGCGACGCG ACCACCCTGCGCCTCTGGCGGCTGCTCGTGGAGCAGTCCGAGCGCTACTTCCTGACCGTC TACGACCTGCTCGACGTGACCCTCACCGAGCGGGACTTCCACGGCGAGAGCAGCTACAAC GACCTGCTCGGCCCGGTCGTCGAGGACCTGGACCGGCTCGGGCTGCTGCGGTCCAGCGAC GGCGCGGCGTGCGTGTTCCCGCCCGGCTCGGTGGGCCGGGACGGGGAGCCGCTGCCGCTG ATCGTGCGCAAGTCCGACGGCGGGTACGGCTACCCGGCGACCGACCTCGCCGCGATCCGG CACCGGACCGGCACGCTGGGCGCGACCCGGCTGCTCTACGTGGTCGGGCTGCCGCAGCGG CGGCACTTCGAGATGGTCTACGCCGCCGCCGCGCAGGCCGGTTGGTTGGCCCCGCCGGCC CGGGCCGAGCACGTCGGGTTCGGCTCGATCCTCGGCCCCGACGGGCGGATGCTGCGCAGC CGGGCCAGCGGGTCGGTCAAGTTGGTCGGGCTGCTGGAGGAGGCGGTGGCCCGGGCCACC GCGCTGGCCCGGGAGCGGAACCCGGAGCTGGGCGAGGCCGAGGCGGCCGAGGTGGGCCGC GCGGTCGGCATCGGCGCGGTCAAGTACGCCGACCTCTCCAGCGACCGGCACAAGGACTAC GTGCTCGACTGGGAGCGGATGCTGTCGCTGGACGGCAACAGCGCGCCCTACCTCCAGTAC GCCCACTCCCGGATCCGGTCGATCTTCCGGCGGGCCGGGGTTGCGGCCCGGCCCGAGGCA CCGGTCTCGCTGGTGGATCCGGCCGAGCGGGCGCTCGCCTTCGAGCTGGTCGGCTTCGGG GCGGTGGTCGGCGCGGTGGCGGAGAACCTGGAGTTCCACCACCTGACCGCTTGCCTGTCC CGGCTCGCCGCCGCGTTCAGCGCGTTCTACGAGCGGTGCCCGGTGCTGCGGGCCGACGAG CCGGTCCGGGAGAGCCGGCTGGTGCTCTGCGACCTGACCGCGCGGGTGCTCCGGCAGGGC CTCCACCTGCTCGGCATCCGCACCCCGGAGCGGCTGTGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001278 Arginyl-tRNA synthetase, class Ia (Family)
IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site (Conserved_site)
IPR005148 Arginyl tRNA synthetase N-terminal domain (Domain)
IPR008909 DALR anticodon binding (Domain)
IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (Domain)
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold (Domain)
IPR015945 Arginyl-tRNA synthetase, class Ia, core (Domain)
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SignalP | No significant hit |
TMHMM | No significant hit |