Dynm_00240 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	37,274 / 38,638 / + [in whole cluster] 37,274 / 38,638 / + [in contig]
Location	37274..38638 [in whole cluster] 37274..38638 [in contig]
Type	CDS
Length	1,365 bp (454 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	DynR3
Gene	dynR3
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	predicted protein kinase
Reference	ACC D0ZNV4 PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 dynR3 Putative regulator 機能解析はされていない。

Sequence

>hypothetical protein [DynR3]
MMLPENPLPGDRPAGLSRTIPRQSRLALATRGAFVVASSAAHLLPAAAGAAVLRPLRGRT
AAARFFYRRLVRHLQRLGPAPVKFGQIMGTRRDLLPPLLCDELGRLHDRVRPMSGRQVRR
ALREAYGPDLSRHFTEVETTARASGSIAGVYRAVRPDGREVALKLQRPGIRRRMALDLAL
IHGAAALAEKLPPGRGVPLAELTGFVCAAVLGQLDFAGERTNLAELRRNFAESDNVWIPA
TLPELCRPNCLAMEFIPDLVARPVAEIDPARRPRLAARTVSAVYQMLFLDGFVHCDLHPG
NVYFKGPRVVVLDAGFSIRLDPTVRRQFADFFLGLALGRGRQCGEVVVDSAVRVAPDADV
DGFIGRVAELVKRNTGVPAKEFQLTRFGTELFTLQRDFGLYAASEFVFPLLSLLVIEGTV
RDLDPDIDFQAAARPMLLRAAAETAHLAPQRRAG

>hypothetical protein [DynR3]
TTGATGCTCCCGGAGAACCCCCTCCCCGGCGACCGCCCCGCCGGACTCTCCCGCACCATC
CCCCGCCAGTCCCGCCTGGCCCTGGCCACCCGTGGCGCGTTCGTGGTGGCCAGCAGCGCC
GCACACCTGCTGCCCGCGGCGGCCGGCGCGGCGGTGCTGCGACCCCTGCGCGGCCGCACC
GCGGCGGCCCGCTTCTTCTACCGCCGGCTGGTCCGGCACCTGCAACGACTCGGCCCGGCG
CCGGTCAAGTTCGGCCAGATCATGGGCACCCGGCGGGACCTCCTGCCGCCCCTGCTCTGC
GACGAGCTGGGCCGGCTGCACGACCGGGTCCGGCCGATGTCCGGCCGGCAGGTGCGCCGC
GCGCTGCGCGAGGCGTACGGGCCGGACCTGAGCCGGCACTTCACCGAGGTCGAGACGACG
GCGCGGGCCAGCGGCAGCATCGCCGGCGTCTACCGGGCCGTCCGGCCGGACGGCCGGGAG
GTGGCGCTGAAGCTGCAACGCCCCGGCATCCGCCGCCGGATGGCGCTCGACCTGGCCCTC
ATCCACGGCGCGGCGGCGCTGGCGGAGAAGCTGCCGCCGGGCCGCGGGGTGCCGCTGGCC
GAGCTGACCGGTTTCGTCTGCGCGGCAGTGCTCGGGCAGCTCGACTTCGCCGGCGAACGG
ACCAACCTGGCCGAGCTGCGGCGCAACTTCGCCGAGTCCGACAACGTGTGGATCCCGGCG
ACGCTCCCGGAGCTGTGCCGGCCCAACTGCCTGGCCATGGAGTTCATCCCGGACCTGGTG
GCCCGCCCGGTCGCCGAGATCGATCCGGCCCGCCGGCCCCGGCTGGCCGCCCGCACCGTG
AGCGCGGTCTACCAGATGCTCTTCCTGGACGGCTTCGTCCACTGTGACCTGCACCCGGGG
AACGTCTACTTCAAGGGACCCCGGGTGGTCGTGCTGGACGCCGGGTTCAGCATCCGGCTC
GACCCGACCGTACGCCGGCAGTTCGCCGACTTCTTCCTCGGCCTGGCGCTGGGACGGGGC
CGGCAGTGCGGCGAGGTGGTGGTGGACAGCGCGGTCCGGGTGGCGCCCGACGCGGACGTC
GACGGCTTCATCGGCCGGGTCGCCGAGCTGGTCAAGCGGAACACCGGGGTGCCGGCCAAG
GAGTTCCAGCTCACCCGCTTCGGCACCGAACTGTTCACCCTGCAACGGGACTTCGGCCTG
TACGCCGCGTCCGAGTTCGTCTTCCCGCTGCTGTCGCTGCTGGTGATCGAGGGGACCGTC
CGCGACCTCGACCCCGACATCGACTTCCAGGCGGCGGCCCGCCCGATGCTGCTGCGCGCC
GCCGCCGAGACCGCCCACCTGGCCCCGCAGCGCCGGGCCGGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR004147 UbiB domain (Domain) PF03109 ABC1 IPR011009 Protein kinase-like domain (Domain) SSF56112 Kinase_like
SignalP	No significant hit
TMHMM	No significant hit

Dynm_00230 Dynm_00250