Dynm_00290 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	43,034 / 41,709 / - [in whole cluster] 43,034 / 41,709 / - [in contig]
Location	complement(41709..43034) [in whole cluster] complement(41709..43034) [in contig]
Type	CDS
Length	1,326 bp (441 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	PBS lyase HEAT-like repeat protein
Gene	orf16
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF19
Reference	ACC B2BM44 PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 orf16 Hypothetical protein genbank: orf19 機能解析はされていない。

Sequence

>hypothetical protein [PBS lyase HEAT-like repeat protein]
MAIDLCNKSPGALAEGAQGAWEEAVPADAAPVNLDALTADQRDALNFSYRTTLPAMDPRF
VAGDPAAWASDFGYALNKVAVRLDNRTNQELRDAALNHPDAAMREQALFEYADRDLPDAI
ELLGQAVLHDPNREVRWDALWAIEKLGGAHAVASLSKFAKDADPEIAEWSHLFRSELQTG
DPAFDGRAGKFTPGRTFDETIYLLIHCDLYVRLDDSNQHWGKISLAPQGLARIYGQAHAC
PNVATRERQLVIAKTIDGLHADGSPHCDNYLFRGFTDRTRRDRGNFFFESLVPRTFFKSG
HADDPSEGTRQANIGFARYGTWHLDPKFQIHDEAAIRYVRGRFQGWGYINLARIAGRSME
EILQPGNGVLSTLHDPEIGHMTNAFILGTFKGKLNDWDGDGVIDMNSRDVYSTVDGEIDM
NQDGVADQPGLTCCDHTTLLP

>hypothetical protein [PBS lyase HEAT-like repeat protein]
ATGGCAATCGATCTCTGCAACAAGTCGCCGGGTGCTCTCGCGGAGGGCGCCCAGGGTGCG
TGGGAGGAGGCGGTCCCGGCCGACGCGGCACCGGTCAACCTGGACGCCCTCACCGCGGAC
CAGCGCGACGCGCTCAACTTCTCCTACCGGACCACGCTGCCGGCGATGGACCCGCGCTTC
GTCGCCGGTGACCCGGCGGCCTGGGCGAGCGACTTCGGGTACGCGCTGAACAAGGTCGCG
GTCCGGCTGGACAACCGCACCAACCAGGAACTGCGCGACGCCGCGCTGAACCACCCCGAC
GCGGCCATGCGCGAGCAGGCCCTGTTCGAGTACGCCGACCGCGACCTGCCGGACGCGATC
GAGCTGCTCGGCCAGGCCGTGCTGCACGACCCCAACCGCGAGGTCCGCTGGGACGCGCTG
TGGGCCATCGAGAAGCTGGGCGGCGCCCACGCGGTCGCCAGCCTCAGCAAGTTCGCCAAG
GACGCGGACCCGGAGATCGCCGAGTGGTCGCACCTGTTCCGCAGCGAGCTGCAGACGGGT
GACCCGGCGTTCGACGGCCGGGCCGGCAAGTTCACCCCGGGCCGCACCTTCGACGAGACC
ATCTACCTGCTGATCCACTGCGACCTGTACGTGCGGCTGGACGACTCCAACCAGCACTGG
GGCAAGATCTCGCTGGCCCCGCAGGGCCTGGCCCGGATCTATGGCCAGGCGCACGCCTGC
CCGAACGTGGCGACCCGCGAGCGGCAGCTGGTGATCGCCAAGACCATCGACGGGCTGCAC
GCCGACGGCTCGCCGCACTGCGACAACTACCTGTTCCGCGGGTTCACCGACCGCACCCGC
CGGGACCGGGGGAACTTCTTCTTCGAGTCGCTGGTGCCCCGGACGTTCTTCAAGTCCGGT
CACGCCGACGACCCGAGCGAGGGCACCCGCCAGGCCAACATCGGCTTCGCCCGGTACGGC
ACCTGGCACCTCGACCCGAAGTTCCAGATCCACGACGAGGCGGCCATCCGCTACGTCCGT
GGTCGCTTCCAGGGCTGGGGCTACATCAACCTGGCCCGGATCGCCGGCCGCTCCATGGAG
GAGATCCTCCAGCCGGGCAACGGCGTGCTCTCCACGCTGCACGACCCGGAGATCGGCCAC
ATGACCAACGCGTTCATCCTCGGCACCTTCAAGGGGAAGCTGAACGACTGGGACGGCGAC
GGGGTCATCGACATGAACTCGCGCGACGTCTACTCGACCGTCGACGGCGAGATCGACATG
AACCAGGACGGCGTGGCGGACCAGCCCGGCCTGACCTGCTGCGACCACACCACCCTGCTG
CCGTAA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR011989 Armadillo-like helical (Domain) G3DSA:1.25.10.10 ARM-like IPR016024 Armadillo-type fold (Domain) SSF48371 ARM-type_fold
SignalP	No significant hit
TMHMM	No significant hit

Dynm_00280 Dynm_00300