Lasal2_00100
Lasal2_00110 : CDS information
Location
| Organism | Streptomyces lasaliensis |
|---|---|
| Strain | ATCC 31180 |
| Entry name | Lasalocid |
| Contig | FM173265 |
| Start / Stop / Direction | 12,046 / 10,490 / - [in whole cluster] 12,046 / 10,490 / - [in contig] |
| Location | complement(10490..12046) [in whole cluster] complement(10490..12046) [in contig] |
| Type | CDS |
| Length | 1,557 bp (518 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | putative resistance protein, transporter |
| Gene | |
| Gene (GenBank) | las2 |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) |
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| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [putative resistance protein, transporter] MSVSDARRWWAVGALALSALVVGLDTTVLNVALPTLATDLEASTSELQWFANAYNLVFAA VLLPAGLSGDRYGRKKLLVVALVLFGAASVGCAYSGSTDALIWWRALLGLGAGFIFPLSL SVLPVMFSDEERPKAIGMVVTASALGLPLGPIVGGWLLDNFWWGSVFLINVPMVALAIVA VLLLLPDSRSPEPPGLDLVGVLLSSAGLAGITYGAIKAGEKSWGDGTALTMLIGGVVLML LFVVWQRHLAARPDGKPLVDLSLFRSPAFTWGAVMATVVSFALFGLLFTVPQYYQAVLGA DALGTGLRLLPIIGGIIVGARVGGKVTAKAGPKRLVSVGFLLMAVGLFMGAVTDTDTSYG YAATWIAVVGLGTGLALPLAVDSALGALSTERSGVGSAVIQTVRQVGGTIGVALLGTILT SSYHSHLEVGSIPDRAADAAGESVSAGVLVAQKLHSPALLSSVQESFVHGMNVMLVVCGA IAVVGTVLAALFMPQQAKREQPGTDPVAPADAQPRGAL
>putative drug resistance transporter [putative resistance protein, transporter] ATGAGCGTCTCGGATGCCCGACGATGGTGGGCGGTGGGCGCCCTGGCGTTGAGTGCGCTG GTGGTGGGCCTGGACACGACGGTCCTGAACGTCGCCCTGCCCACGCTCGCCACCGACCTG GAGGCCTCGACCAGCGAACTGCAGTGGTTCGCCAACGCCTACAACCTGGTCTTCGCCGCG GTGCTGCTGCCGGCGGGGCTCTCCGGTGACCGCTATGGCCGCAAGAAGCTGCTCGTGGTG GCACTGGTCCTGTTCGGCGCCGCCTCCGTCGGCTGCGCCTACTCCGGCTCCACGGACGCC CTGATCTGGTGGCGCGCCCTGCTCGGCCTGGGCGCCGGGTTCATCTTCCCGCTGTCCCTG TCGGTGCTCCCCGTGATGTTCTCCGACGAGGAGCGACCGAAGGCGATCGGCATGGTCGTG ACCGCCAGCGCGCTCGGGCTCCCGCTCGGCCCGATCGTCGGCGGCTGGCTGCTGGACAAC TTCTGGTGGGGCTCGGTCTTCCTCATCAACGTCCCCATGGTCGCCCTCGCGATCGTCGCC GTCCTGCTGCTGCTGCCCGACTCCCGCAGCCCGGAACCTCCGGGGCTCGACCTGGTGGGC GTCCTGCTCTCCAGCGCCGGCCTCGCCGGCATCACTTACGGGGCCATCAAGGCCGGCGAG AAGAGCTGGGGCGACGGCACGGCCCTCACGATGCTGATCGGCGGCGTGGTCCTGATGCTG CTGTTCGTCGTGTGGCAGCGCCATCTCGCGGCGCGCCCCGACGGCAAGCCCCTGGTCGAC CTCTCGCTCTTCAGGTCACCCGCGTTCACCTGGGGCGCGGTGATGGCCACAGTCGTGTCG TTCGCCCTGTTCGGACTGCTGTTCACCGTGCCGCAGTACTACCAGGCCGTCCTCGGCGCC GACGCCCTCGGCACGGGACTGCGGCTGCTGCCGATCATCGGCGGCATCATCGTCGGCGCC CGGGTGGGCGGCAAGGTCACCGCCAAGGCGGGGCCCAAGCGGCTGGTCTCCGTGGGCTTC CTGCTGATGGCCGTCGGACTGTTCATGGGAGCGGTGACCGACACCGACACCTCCTACGGC TACGCGGCCACCTGGATCGCCGTCGTCGGCCTCGGCACGGGCCTCGCGCTCCCCCTGGCC GTCGACTCGGCGCTCGGCGCGCTGTCGACCGAACGCAGCGGCGTCGGCTCCGCCGTGATC CAGACGGTCCGCCAGGTCGGCGGCACCATCGGCGTGGCGCTCCTCGGCACCATCCTGACC TCCTCCTACCACAGCCACCTGGAGGTGGGTTCGATCCCCGACCGGGCCGCGGACGCGGCA GGGGAGAGCGTTTCCGCCGGCGTCCTCGTCGCGCAGAAGCTGCACTCGCCCGCCCTGCTC TCCAGCGTGCAGGAGTCGTTCGTCCACGGCATGAACGTGATGCTGGTCGTCTGCGGCGCC ATCGCCGTCGTCGGCACCGTGCTCGCGGCGCTGTTCATGCCGCAGCAGGCGAAGCGGGAG CAGCCGGGCACCGACCCCGTCGCCCCGGCCGACGCCCAGCCGCGGGGCGCGCTCTAG
Feature
| BLASTP Database:UniProtKB:2011_09 |
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|---|---|
| InterPro Database:interpro:38.0 |
IPR004638 Drug resistance transporter EmrB/QacA subfamily (Family)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
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| SignalP | No significant hit |
| TMHMM |  ![[12-34] Transmembrane (i-o)](../../img/C.gif "[12-34] Transmembrane (i-o)"){kind=small} ![[49-68] Transmembrane (o-i)](../../img/G.gif "[49-68] Transmembrane (o-i)"){kind=small} |
![[13-490] 3.19999999999996e-80 TIGR00711](../../img/T.gif "[13-490] 3.19999999999996e-80 TIGR00711"){kind=small}
![[15-411] 7.00000000000005e-54 PF07690](../../img/H.gif "[15-411] 7.00000000000005e-54 PF07690"){kind=small}
![[1-502] 2.80000504261099e-80 SSF103473](../../img/B.gif "[1-502] 2.80000504261099e-80 SSF103473"){kind=small}
![[11-497] PS50850](../../img/M.gif "[11-497] PS50850"){kind=small}
