English site

Microbe : Lactobacillus plantarum subsp. plantarum

Microbe Description

NBRC No. 15891
Scientific name Lactobacillus plantarum subsp. plantarum
Synonymous name Not assigned
History IFO 15891 <- JCM 1149 <- ATCC 14917 <- P.A. Hansen, Lp 39 <- Roy. Techn. Coll., Copenhagen <- S. Orla-Jensen, No. 39
Other culture collection No. ATCC 14917=DSM 20174=IAM 12477=JCM 1149=NRIC 1067
Other No.
Reference
Not assigned

Functional Potential >>Details

Download
TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseHMPREF0531_12314
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseHMPREF0531_11156 HMPREF0531_12298
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseHMPREF0531_12672
Chloramphenicol resistance(NFUNC_0025)
RequireA
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseHMPREF0531_10803
GABA biosynthesis(NFUNC_0066)
RequireA
GAD
(NRULE_0231)
Glutamate decarboxylaseHMPREF0531_12685
Macrolide antibiotic resistance(NFUNC_0045)
RequireB
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseHMPREF0531_12236
Malolactic fermentation(NFUNC_0070)
RequireA
MLE
(NRULE_0233)
Malolactic enzymeHMPREF0531_10007
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinHMPREF0531_12431 HMPREF0531_10254
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0531_10768 HMPREF0531_13081
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0531_10768 HMPREF0531_13081
Phenol degradation(NFUNC_0028)
RequireB
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseHMPREF0531_12294
Tannin degradation(NFUNC_0082)
RequireA
TASE
(NRULE_0255)
TannaseHMPREF0531_12033
Uptake of osmoprotectant(NFUNC_0061)
RequireA
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinHMPREF0531_10642
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinHMPREF0531_10641 HMPREF0531_10643
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinHMPREF0531_10640

Genomic Overview

BioProject IDPRJNA31515
Locus_tag
INSDC entriesACGZ02000000
Sequence statusWGS
Current statusImproved High-Quality Draft
Contig number36
Size(bp) 3,198,761
Gene 3,154
Finishing goalImproved High-Quality Draft
Assembly methodNewbler Assembler v. 1.1.03.24_64
Coverage36x
Technology
  • 454
Reference

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz
FASTA
gz
FASTA
gz
TSV
uncompressed
975.7 KB 894.2 KB 583.6 KB 268.7 KB