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Microbe : Chitinophaga pinensis

Microbe Description

NBRC No. 15968
Scientific name Chitinophaga pinensis
Synonymous name Not assigned
History IFO 15968 <- DSM 2588 <- UQM 2034 <- V. Sangkhobol & V.B.D. Skerman
Other culture collection No. ATCC 43595=DSM 2588=LMG 13176=NCIMB 11800=UQM 2034
Other No.
Reference
Not assigned

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseCpin_0233
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseCpin_2707 Cpin_1692 Cpin_2757 Cpin_3545
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCpin_1257
Metal-binding protein(NFUNC_0105)
RequireC
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCpin_2241 Cpin_5188
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCpin_5188 Cpin_2241
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinCpin_2242
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytaseCpin_1035
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
RequireA
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseCpin_2573
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseCpin_2574
Participant 
GLGX
(NRULE_0139)
Glycogen debranching enzymeCpin_2576

Genomic Overview

BioProject IDPRJNA27951
Locus_tagCPIN
INSDC entriesCP001699
Sequence statusComplete
Current status
Contig number1
Size(bp) 9,127,347
Gene 7,192
Finishing goal
Assembly method
Coverage
Technology
Reference
  • Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034). (Stand Genomic Sci. 2010) PMID: 21304681

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
2.7 MB 2.4 MB 1.7 MB 546.6 KB