Microbe : Gemmata obscuriglobus

Microbe Description

NBRC No.	Not assigned
Scientific name	Gemmata obscuriglobus
Synonymous name	Not assigned
History
Other culture collection No.
Other No.	UQM 2246
Reference	Not assigned

Functional Potential >>Details


Type	Pattern	Component Gene		CDS
Anthranilate biosynthesis(NFUNC_0038)
Require	A	GLAT (NRULE_0142)	Glutamine amidotransferase	GEMOB_RS09230
Require	A	TRPE (NRULE_0143)	Anthranilate synthase component I	GEMOB_RS02845
Aromatic azo compounds degradation(NFUNC_0073)
Require	A	AZOR (NRULE_0236)	FMN-dependent NADH-azoreductase	GEMOB_RS28055
Bacitracin resistance(NFUNC_0022)
Require	A	UPPP (NRULE_0097)	Undecaprenyl-diphosphatase	GEMOB_RS09325
Metal-binding protein(NFUNC_0105)
Require	C	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	GEMOB_RS14915 GEMOB_RS09130
Require	H	NIKR (NRULE_0331)	Nickel-responsive transcriptional regulator NikR	GEMOB_RS41295
Molybdate transport (ABC transporter)(NFUNC_0097)
Require	A	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	GEMOB_RS14915 GEMOB_RS09130
Riboflavin biosynthesis(NFUNC_0058)
Require	A	RIBB (NRULE_0200)	3,4-dihydroxy-2-butanone 4-phosphate synthase	GEMOB_RS07745
		RIBA (NRULE_0201)	GTP cyclohydrolase-2	GEMOB_RS07745
		RIBD (NRULE_0202)	Riboflavin biosynthesis protein RibD	GEMOB_RS35630
		RIBH (NRULE_0203)	6,7-dimethyl-8-ribityllumazine synthase	GEMOB_RS13240
		RIBE (NRULE_0204)	Riboflavin synthase	GEMOB_RS22950
Participant		RIBF (NRULE_0205)	Riboflavin biosynthesis protein RibF	GEMOB_RS05250
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
Require	A	TREY (NRULE_0140)	Maltooligosyl trehalose synthase	GEMOB_RS09650
Require	A	TREZ (NRULE_0141)	Malto-oligosyltrehalose trehalohydrolase	GEMOB_RS41835 GEMOB_RS09645
Participant		GLGX (NRULE_0139)	Glycogen debranching enzyme	GEMOB_RS28385 GEMOB_RS12450

Genomic Overview

BioProject ID	PRJNA20997
Locus_tag	GEMOB
INSDC entries	NZ_ABGO01000001
Sequence status	Contig
Current status
Contig number	922
Size(bp)	9,161,841
Gene	7,436
Finishing goal
Assembly method
Coverage
Technology

Reference

Data Download

Genomic nucleotide sequence	Nucleotide sequence of the coding regions	Translation of the coding sequneces	List of genes / ORFs
FASTA gz	FASTA gz	FASTA gz	TSV uncompressed

2.7 MB	2.0 MB	1.3 MB	549.7 KB