Rifam_00050
Rifam_00060 : CDS information
Location
| Organism | Amycolatopsis mediterranei |
|---|---|
| Strain | S699 |
| Entry name | Rifamycin |
| Contig | AF040570 |
| Start / Stop / Direction | 4,360 / 5,685 / + [in whole cluster] 4,360 / 5,685 / + [in contig] |
| Location | 4360..5685 [in whole cluster] 4360..5685 [in contig] |
| Type | CDS |
| Length | 1,326 bp (441 aa) |
Annotation
| Category | 5.2 function unknown |
|---|---|
| Product | mammalian cell entry family protein |
| Product (GenBank) | putative secreted protein |
| Gene | |
| Gene (GenBank) | |
| EC number | |
| Keyword |
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| Note | |
| Note (GenBank) |
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| Reference |
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| Family/Domain |
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Sequence
>mammalian cell entry family protein [putative secreted protein] MRTLRRRLLGLLLIAVMVGGVALSIALYDKAFTPVVTVRLQADKIGNQLIKQSDVKVRGL IVGSVQDIVATDHGAELTLALQPESAKLIPENVSARFLPKTLFGERFVSLEIPKDPSAKT IADGDVIPQDRTSSAIELDQAFEHLMPVLQAVQPQKLSATLTAISTALQGRGDQLGDTLS QLGTYIGELNPHEPELQHNLKALAEFSDHLKDAAPDLVQSLDNLSTTTRTVVDERQNLSN LYGSLTQASVDLQTFLQNNKDNIISLVDTARPTAELLAKYAPEYPCVISQMAKNVPLIDQ ALGKGTNQPGLHATIEIIVPRAPYQAGKEEPRFDDKRGPRCYDIKDIPKPFPSEPPDGAF KDGTLHQAAPKSVGEGLNPAKFKADSAGNGGSGGDLAYSTAEQGFLADLLGPQLGMSAAD VPGWSSLLVGPLYRGAEVTVK
>mammalian cell entry family protein [putative secreted protein] ATGAGGACGCTCCGACGCAGGCTGCTCGGCCTGCTGCTCATCGCCGTGATGGTCGGCGGG GTGGCGCTGTCCATCGCGCTCTACGACAAGGCGTTCACCCCGGTCGTCACGGTCAGGCTG CAGGCCGACAAGATCGGCAACCAGCTGATCAAGCAGTCCGACGTCAAGGTGCGCGGCCTG ATCGTCGGCTCGGTGCAGGACATCGTCGCCACCGACCACGGCGCCGAGCTGACCCTGGCG CTCCAGCCGGAGTCCGCGAAGCTCATCCCGGAGAACGTCTCGGCGCGGTTCCTGCCCAAG ACGCTCTTCGGCGAGCGGTTCGTCTCGCTGGAGATCCCGAAGGACCCGTCGGCCAAGACG ATCGCAGACGGCGACGTCATCCCGCAGGACCGCACGTCGAGCGCGATCGAGCTGGACCAG GCCTTCGAGCACCTGATGCCGGTGCTGCAGGCGGTGCAGCCGCAGAAGCTGTCGGCGACG CTCACCGCGATCTCGACCGCGCTGCAGGGCCGCGGCGACCAGCTCGGCGACACGCTCTCG CAGCTGGGCACCTACATCGGCGAGCTGAACCCGCACGAGCCGGAGCTGCAGCACAACCTC AAGGCGCTCGCGGAGTTCTCCGACCACCTCAAGGACGCGGCCCCGGACCTGGTGCAGAGC CTGGACAACCTGAGCACGACAACCCGCACCGTGGTCGACGAGCGGCAGAACCTGTCGAAC CTCTACGGCAGCCTGACCCAGGCCTCGGTGGACCTGCAGACGTTCCTGCAGAACAACAAG GACAACATCATCTCCCTCGTCGACACCGCCCGGCCGACGGCCGAACTGCTGGCGAAGTAC GCGCCGGAGTACCCCTGCGTGATCTCCCAGATGGCCAAGAACGTGCCGCTGATCGACCAG GCGCTCGGCAAGGGCACCAACCAGCCCGGCCTGCACGCGACCATCGAGATCATCGTCCCG CGCGCGCCGTACCAGGCGGGCAAGGAAGAGCCGCGGTTCGACGACAAGCGCGGCCCGCGC TGCTACGACATCAAGGACATCCCGAAGCCGTTCCCGTCCGAGCCGCCGGACGGCGCGTTC AAGGACGGCACGCTGCACCAGGCCGCGCCGAAGAGCGTCGGCGAGGGCCTCAACCCGGCC AAGTTCAAGGCGGACTCGGCCGGCAACGGCGGCAGCGGTGGTGATCTGGCGTACTCGACG GCGGAGCAGGGCTTCCTGGCCGACCTGCTCGGCCCGCAGCTGGGCATGAGCGCCGCGGAC GTCCCGGGCTGGAGCTCGCTGCTCGTCGGCCCGCTGTACCGGGGTGCGGAGGTGACGGTC AAGTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
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|---|---|
| InterPro Database:interpro:38.0 |
IPR003399 Mammalian cell entry-related (Domain)
IPR005693 Mammalian cell entry (Family)
IPR024516 Mammalian cell entry, C-terminal (Domain)
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| SignalP |  ![[1-42] 1 Signal](../../img/R.gif "[1-42] 1 Signal"){kind=small} |
| TMHMM | ![[7-29] Transmembrane (i-o)](../../img/C.gif "[7-29] Transmembrane (i-o)"){kind=small} |
![[36-111] 1.3e-09 PF02470](../../img/H.gif "[36-111] 1.3e-09 PF02470"){kind=small}
![[9-292] 2.7e-60 TIGR00996](../../img/T.gif "[9-292] 2.7e-60 TIGR00996"){kind=small}
