Rifam_00090
Rifam_00100 : CDS information
Location
| Organism | Amycolatopsis mediterranei |
|---|---|
| Strain | S699 |
| Entry name | Rifamycin |
| Contig | AF040570 |
| Start / Stop / Direction | 8,871 / 10,043 / + [in whole cluster] 8,871 / 10,043 / + [in contig] |
| Location | 8871..10043 [in whole cluster] 8871..10043 [in contig] |
| Type | CDS |
| Length | 1,173 bp (390 aa) |
Annotation
| Category | 5.2 function unknown |
|---|---|
| Product | mammalian cell entry family protein |
| Product (GenBank) | putative secreted protein |
| Gene | |
| Gene (GenBank) | |
| EC number | |
| Keyword |
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| Note | |
| Note (GenBank) |
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| Reference |
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| Family/Domain |
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Sequence
>mammalian cell entry family protein [putative secreted protein] MKKLLTVGVLATVSALALSGCAFKGIYDLPLPGGADLGDHPYTVNVEFRDVLDLTPQAGV KVDEVPVGRVENVGLTKDGWHALVTLRVNGDVKLPANAIANVKQSSLLGEKYVELASPGA DQAHGKLADNATIPLARTNRSVEVEELLGALSLLLNGGGVDQLNTITKELNNATSGREPD IKALLDNANQLVTNLDRQSKNITRAIDGLNRLSSTLNDQKDKLVGAVDNLGPGLGVLEQQ RGQLVTMLQALDNLSGVATDTVNKSQKDLVADLKALTPTLQKLGEAGNDLPKALEILLTF PFSDQAVNGVKGDYFNLFAKVDLNLKTVVENLGNSRQNALSGQLPLAGLTGGVQGTPANQ PPPLPIPGTGQQQSKPGLGNLFGLLPGGAG
>mammalian cell entry family protein [putative secreted protein] GTGAAGAAACTCCTGACCGTCGGGGTGCTGGCCACCGTGTCCGCGCTGGCGCTCTCCGGC TGTGCCTTCAAGGGCATCTACGACCTGCCGCTGCCCGGTGGCGCCGACCTCGGCGACCAC CCGTACACGGTGAACGTCGAGTTCCGGGACGTGCTCGACCTGACCCCGCAGGCGGGGGTG AAGGTCGACGAGGTGCCGGTCGGCCGGGTCGAGAACGTCGGGCTCACCAAGGACGGCTGG CACGCGCTGGTCACCTTGCGGGTCAACGGCGACGTCAAGCTGCCGGCCAACGCGATCGCC AACGTCAAGCAGTCCAGCCTGCTCGGGGAGAAGTACGTCGAGCTGGCCTCGCCCGGCGCC GACCAGGCCCACGGCAAGCTCGCCGACAACGCGACCATCCCGCTGGCCCGCACGAACCGC AGCGTCGAGGTCGAAGAGCTGCTCGGGGCGCTGTCCCTGCTGCTCAACGGCGGTGGCGTC GACCAGCTGAACACCATCACCAAGGAGCTCAACAACGCCACGTCCGGCCGCGAGCCGGAC ATCAAGGCGTTGCTGGACAACGCGAACCAGCTGGTGACGAACCTCGACCGGCAGTCGAAG AACATCACCCGGGCCATCGACGGGCTGAACCGGCTCTCCTCGACCCTCAACGACCAGAAG GACAAGCTGGTCGGCGCGGTCGACAACCTCGGGCCCGGGCTCGGCGTGCTGGAGCAGCAG CGCGGCCAGCTGGTCACCATGCTGCAGGCGCTGGACAACCTCTCCGGCGTCGCCACCGAC ACGGTGAACAAGTCGCAGAAGGACCTCGTCGCCGACCTGAAGGCGCTGACGCCGACGCTG CAGAAGCTCGGCGAGGCGGGCAACGACCTGCCGAAGGCGCTGGAGATCCTGCTGACTTTC CCGTTCAGCGACCAGGCCGTCAACGGCGTCAAGGGCGACTACTTCAACCTGTTCGCGAAG GTGGACCTGAACCTGAAGACCGTCGTGGAGAACCTGGGCAACAGCCGGCAGAACGCCCTG TCCGGGCAGCTGCCGCTGGCCGGCCTGACCGGCGGGGTGCAGGGCACGCCGGCCAACCAG CCGCCACCGCTGCCGATCCCCGGCACCGGGCAGCAGCAGTCGAAGCCGGGCCTGGGCAAC CTCTTCGGGCTCCTGCCGGGAGGTGCGGGCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
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|---|---|
| InterPro Database:interpro:38.0 |
IPR003399 Mammalian cell entry-related (Domain)
IPR005693 Mammalian cell entry (Family)
IPR024516 Mammalian cell entry, C-terminal (Domain)
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| SignalP |  ![[1-17] 0.996 Signal](../../img/R.gif "[1-17] 0.996 Signal"){kind=small} |
| TMHMM | No significant hit |
![[41-116] 2.2e-14 PF02470](../../img/H.gif "[41-116] 2.2e-14 PF02470"){kind=small}
![[10-302] 4.6e-70 TIGR00996](../../img/T.gif "[10-302] 4.6e-70 TIGR00996"){kind=small}
