Rifam_00080
Rifam_00090 : CDS information
Location
| Organism | Amycolatopsis mediterranei |
|---|---|
| Strain | S699 |
| Entry name | Rifamycin |
| Contig | AF040570 |
| Start / Stop / Direction | 7,690 / 8,874 / + [in whole cluster] 7,690 / 8,874 / + [in contig] |
| Location | 7690..8874 [in whole cluster] 7690..8874 [in contig] |
| Type | CDS |
| Length | 1,185 bp (394 aa) |
Annotation
| Category | 5.2 function unknown |
|---|---|
| Product | mammalian cell entry family protein |
| Product (GenBank) | putative secreted protein |
| Gene | |
| Gene (GenBank) | |
| EC number | |
| Keyword |
|
| Note | |
| Note (GenBank) |
|
| Reference |
|
| Family/Domain |
|
Sequence
>mammalian cell entry family protein [putative secreted protein] MSDTRFGLALTRGFTIAIVLALVVAGGIWWTLKDAGRNHLTAYFAGAVGLYEGNSVRMLG VDMGTVTKITPMGNQVKVDFEYDRSVAVPADAKALIVAPSLVSDRYVQLAPAYTGGPRIS DGAVIGLDRTEVPLEVDQLAASLARVSETLGPNGANKSGSLSNLLNTAAANVDGNGKALH DTITKLGQAAGTLSGNKDDLFSTVENLGKFSQTLADSDKQVRSFESQLAGVSGYLASEKD NLAATVQQLGTTLTAVQAFIDANHDRLKSNVDKLAGITKVLVDQRSSLAEILDVAPVGLS NLVNTYNGAAGTLDARPNLNELTQPPLVMICRLLKQVGSKGIPDVLGNACESIAGVVDKV IPLPSVAQTVQALQSGQLPPLPLPIAGQLYGGGQ
>mammalian cell entry family protein [putative secreted protein] ATGAGTGACACCCGCTTCGGACTGGCCCTGACCCGGGGCTTCACCATCGCGATCGTCCTC GCGCTCGTCGTCGCCGGCGGGATCTGGTGGACCCTCAAGGACGCCGGCCGCAACCACCTG ACCGCGTACTTCGCCGGCGCCGTCGGCCTGTACGAGGGCAACAGCGTGCGGATGCTCGGC GTCGACATGGGCACGGTCACCAAGATCACCCCGATGGGCAACCAGGTGAAGGTCGACTTC GAGTACGACCGCTCGGTCGCCGTCCCGGCGGACGCGAAGGCGCTCATCGTGGCGCCGTCG CTGGTGTCCGACCGCTACGTCCAGCTGGCCCCGGCCTACACCGGCGGCCCGCGGATCTCC GACGGCGCGGTCATCGGCCTCGACCGCACCGAGGTGCCGCTGGAGGTCGACCAGCTGGCG GCCAGCCTGGCCCGGGTCAGCGAGACCCTCGGCCCGAACGGCGCCAACAAGTCCGGGTCG CTGTCGAACCTGCTGAACACCGCGGCGGCCAACGTCGACGGCAACGGCAAGGCCCTGCAC GACACGATCACCAAGCTCGGCCAGGCGGCCGGCACGCTGTCGGGCAACAAGGACGACCTG TTCTCCACCGTCGAGAACCTCGGCAAGTTCTCGCAGACGCTGGCCGACTCCGACAAGCAG GTCCGCAGCTTCGAGAGCCAGCTCGCCGGCGTCAGCGGCTACCTGGCGTCCGAAAAGGAC AACCTGGCCGCGACCGTGCAGCAGCTCGGCACGACGCTGACCGCGGTGCAGGCGTTCATC GACGCCAACCACGACCGGCTCAAGTCCAATGTGGACAAGCTGGCCGGCATCACCAAGGTG CTCGTCGACCAGCGCAGCTCGCTCGCCGAGATCCTCGACGTCGCCCCGGTCGGCCTGAGC AACCTGGTCAACACCTACAACGGCGCGGCGGGCACGCTCGACGCCCGGCCGAACCTCAAC GAGCTGACCCAGCCGCCGCTGGTGATGATCTGCCGGCTGCTCAAGCAGGTCGGCAGCAAG GGCATTCCGGACGTGCTCGGCAACGCCTGCGAGAGCATCGCCGGCGTGGTCGACAAGGTG ATCCCGCTGCCGTCCGTGGCGCAGACCGTGCAGGCCCTGCAGTCCGGTCAGCTGCCGCCG CTGCCGCTGCCCATCGCCGGGCAGCTCTACGGAGGTGGCCAGTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR003399 Mammalian cell entry-related (Domain)
IPR005693 Mammalian cell entry (Family)
IPR024516 Mammalian cell entry, C-terminal (Domain)
|
| SignalP |  ![[1-25] 0.659 Signal](../../img/R.gif "[1-25] 0.659 Signal"){kind=small} |
| TMHMM | ![[13-32] Transmembrane (i-o)](../../img/C.gif "[13-32] Transmembrane (i-o)"){kind=small} |
![[38-111] 2.1e-12 PF02470](../../img/H.gif "[38-111] 2.1e-12 PF02470"){kind=small}
![[15-299] 2.4e-65 TIGR00996](../../img/T.gif "[15-299] 2.4e-65 TIGR00996"){kind=small}
