Rifam_00610 Rifam_00610   Rifam_00630 Rifam_00630

Rifam_00620 : CDS information

close this sectionLocation

Organism
StrainS699
Entry nameRifamycin
Contig
Start / Stop / Direction104,813 / 105,298 / + [in whole cluster]
104,813 / 105,298 / + [in contig]
Location104813..105298 [in whole cluster]
104813..105298 [in contig]
TypeCDS
Length486 bp (161 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF37
Reference
ACC
PmId
[16079331] Identification of tailoring genes involved in the modification of the polyketide backbone of rifamycin B by Amycolatopsis mediterranei S699. (Microbiology. , 2005)
comment
[PMID: 9512878, 9497318, 11278540]
UniProtに登録されているこれらの論文には、図表を含め、このORFについての記述がない。

---
[PMID: 16079331](2005)
fig2のschemaなどplasmid作成に関して記述はあるが、各ORFの詳細は不明。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MTRLAGPVVPRAVGCRDGSDDRVRVAERAPRVLTPPGRAARAPEVRLPQASGRPGGRPAS
RAVGEGAVCPRRAQWCPAPRRWAPRCPRALTPPRAVVPRCAGRARSRRRGRVVPGVSAAR
ARAAGSCVRCAGRTRSRRRGWRAGRGCHRAPSHACAAAGRP
selected fasta
>hypothetical protein [hypothetical protein]
GTGACGCGGCTGGCGGGGCCGGTGGTTCCCCGGGCGGTTGGGTGCCGTGACGGGAGTGAC
GACCGGGTCCGCGTAGCCGAGCGGGCACCAAGGGTGCTCACGCCGCCGGGGAGGGCGGCG
CGGGCCCCGGAGGTCCGGCTGCCCCAGGCTTCGGGGCGGCCGGGTGGTCGGCCGGCGAGC
CGAGCCGTCGGGGAGGGTGCCGTCTGCCCCCGACGGGCTCAGTGGTGTCCGGCGCCTCGG
CGGTGGGCACCGCGGTGTCCACGCGCGCTCACGCCGCCGCGGGCGGTGGTGCCCCGGTGT
GCCGGCCGCGCGCGCTCACGCCGTCGCGGGCGGGTGGTCCCCGGTGTGTCGGCCGCGCGC
GCTCGCGCCGCGGGCAGTTGTGTCCGTTGTGCCGGCCGCACGCGCTCACGCCGCCGTGGG
TGGCGCGCCGGTCGTGGATGCCACCGCGCGCCCTCGCACGCTTGCGCCGCCGCAGGGCGT
CCGTAA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit
Rifam_00610 Rifam_00610   Rifam_00630 Rifam_00630
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