Indano_00030 Indano_00030   Indano_00050 Indano_00050

Indano_00040 : CDS information

close this sectionLocation

Organism
StrainNRRL 8167
Entry nameIndanomycin
Contig
Start / Stop / Direction3,383 / 4,144 / + [in whole cluster]
3,383 / 4,144 / + [in contig]
Location3383..4144 [in whole cluster]
3383..4144 [in contig]
TypeCDS
Length762 bp (253 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
  • This ORF is not involved in indanomycin biosynthesis.
Note (GenBank)
  • Orf4
Reference
ACC
PmId
[19301315] Analysis of the indanomycin biosynthetic gene cluster from Streptomyces antibioticus NRRL 8167. (Chembiochem. , 2009)
comment
indanomycin biosynthetic gene clusterに関する文献。

orf4(253a.a): hypothetical protein of unknown function

orf4自体の機能実験は無いが、欠損させてもindanomycinの生産が減少したり消失することは無いとの記載有り。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MQCALSDGGGGRGVELVDAFLQGIPQPEDLWAFAVHGVFGPGVAVTVYLLYVLVTAWLGT
IRSTVTLVRRLGGVAHDAHVRLVEMSATQITAAVGLSLLLALVLCGWLTGVLVIGNLIAF
AYQKSGHDFLELQTRDAASLVDWLQWNAFTKGYLIAALAVVLIAAVHRGSPNLGFLAFLI
GIPAMPWGLSIAVLVVFETILGCFAWMGTGDYSAGAGFTWHLAFAAVVAAYLGACVVALR
AARSLGRLWLARE
selected fasta
>hypothetical protein [hypothetical protein]
GTGCAGTGCGCCCTGTCCGATGGGGGCGGGGGGCGAGGAGTCGAGCTCGTGGACGCGTTC
TTGCAGGGCATTCCCCAACCCGAGGACCTGTGGGCGTTCGCCGTCCACGGCGTCTTCGGG
CCGGGCGTCGCCGTCACCGTGTACCTGCTGTACGTCCTGGTCACCGCCTGGCTGGGCACC
ATCAGGTCGACCGTGACGCTGGTCCGCCGGTTGGGCGGGGTGGCTCATGACGCCCATGTC
CGGCTGGTCGAGATGTCCGCGACGCAGATCACCGCGGCCGTGGGGCTCTCGCTTCTGCTC
GCGCTGGTGCTGTGCGGCTGGCTGACCGGTGTGCTCGTCATCGGCAATCTGATCGCCTTC
GCCTACCAGAAGTCCGGGCACGACTTCCTGGAACTGCAGACGCGGGACGCCGCATCGCTC
GTGGACTGGCTGCAGTGGAACGCCTTCACGAAGGGCTATCTCATCGCGGCGTTGGCCGTG
GTGCTGATCGCGGCCGTCCACCGCGGGAGTCCCAACCTGGGTTTCCTGGCCTTCCTGATC
GGCATCCCGGCCATGCCGTGGGGTCTGTCGATCGCCGTCCTGGTGGTGTTCGAGACCATC
CTGGGCTGCTTCGCGTGGATGGGGACGGGGGACTACTCGGCAGGGGCCGGTTTCACCTGG
CATCTGGCCTTCGCGGCAGTCGTCGCCGCCTATCTCGGCGCGTGTGTCGTCGCCCTGCGC
GCGGCCAGGAGCCTGGGCCGCCTGTGGCTCGCGCGGGAGTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro No significant hit
SignalP
[1-1] Signal-anchor
Eukaryota   
TMHMM
[39-61] Transmembrane (o-i) [98-120] Transmembrane (i-o) [144-166] Transmembrane (o-i) [175-197] Transmembrane (i-o) [217-239] Transmembrane (o-i)
Transmembrane 5   
Indano_00030 Indano_00030   Indano_00050 Indano_00050
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