Ncarz_00240 Ncarz_00240   Ncarz_00260 Ncarz_00260

Ncarz_00250 : CDS information

close this sectionLocation

Organism
StrainATCC 15944
Entry nameNeocarzinostatin
Contig
Start / Stop / Direction45,578 / 44,775 / - [in whole cluster]
45,578 / 44,775 / - [in contig]
Locationcomplement(44775..45578) [in whole cluster]
complement(44775..45578) [in contig]
TypeCDS
Length804 bp (267 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
GenencsE11
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[15797213] The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases. (Chem Biol. , 2005)
comment
Neocarzinostatin生合成遺伝子クラスターの報告。

ncsE11: Unknown protein

ncsE-ncsE11とncsF1-ncsF2が、NCS enediyne core biosynthesisに関与するとしている。
このORFについて機能解析はされていない。

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MTTTNEVLVDLAADIDEVARLVERLDDKTWSRSTPAPGWSIADQVAHLTFIFTLAKNAAA
APDRFRTMTAAAAQDFNGAVNAALAQFNAFPPRELLARFRAEGDASLKALTAVPAGQTVP
WLVRPLPPAVLASAGMMEVFGHGQDIADALGVRREPTDRLRHLVHFAFLTRDFGYQARGI
TPPADPFHFMLTAPSGEVWTEGPEDATQTVSGPAHDLCLLVTRRRHRDDLELTATGDDAE
AWLDVAQAYRGPAGEGRAPGQFAKTVV
selected fasta
>hypothetical protein [unknown]
ATGACCACCACCAACGAAGTTCTCGTTGACCTTGCCGCCGACATCGACGAGGTCGCCCGC
CTTGTGGAACGCTTGGACGACAAGACCTGGTCCCGCTCCACGCCTGCTCCCGGCTGGAGC
ATCGCGGACCAGGTGGCACACCTGACCTTCATCTTCACGCTGGCCAAGAACGCGGCAGCA
GCGCCGGACCGCTTCCGGACGATGACCGCCGCGGCGGCGCAGGACTTCAACGGCGCGGTC
AACGCCGCCCTCGCCCAGTTCAACGCGTTCCCTCCGCGTGAGCTGCTCGCCCGGTTCCGC
GCCGAGGGAGACGCCTCGCTGAAGGCCCTGACCGCTGTTCCCGCGGGCCAGACCGTTCCC
TGGCTCGTTCGTCCGCTGCCGCCGGCGGTGCTCGCCAGCGCCGGGATGATGGAGGTCTTC
GGCCACGGGCAGGACATCGCTGACGCCCTGGGAGTACGCAGGGAGCCCACCGACCGACTG
CGCCACCTGGTGCACTTCGCTTTTCTCACACGGGACTTCGGGTACCAGGCGCGAGGCATC
ACGCCACCGGCCGATCCCTTCCACTTCATGCTCACGGCTCCCTCGGGCGAGGTGTGGACC
GAGGGGCCGGAGGATGCCACCCAGACCGTCAGCGGACCGGCGCACGACCTCTGCCTTCTT
GTGACTCGCCGCCGTCATCGCGACGATCTCGAGCTGACGGCGACGGGCGACGACGCGGAG
GCCTGGCTGGATGTCGCTCAGGCCTACCGCGGCCCTGCGGGTGAAGGCCGTGCACCGGGT
CAGTTCGCCAAGACCGTCGTGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR013917 tRNA wybutosine-synthesis (Domain)
[183-235] 2e-05 PF08608
PF08608   Wyosine_form
IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type (Family)
[11-224] 4.2e-41 TIGR03083
TIGR03083   TIGR03083
IPR017518 Conserved hypothetical protein CHP03084 (Family)
[6-257] 7.40000000000007e-103 TIGR03084
TIGR03084   TIGR03084
IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain (Domain)
[11-147] 7.5e-29 PF11716
PF11716   MDMPI_N
SignalP No significant hit
TMHMM No significant hit
Ncarz_00240 Ncarz_00240   Ncarz_00260 Ncarz_00260
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